Publications Peer reviewed articles (23) Structural Basis for Draxin-Modulated Axon Guidance and Fasciculation by Netrin-1 through DCC Author(s): Ying Liu, Tuhin Bhowmick, Yiqiong Liu, Xuefan Gao, Haydyn D.T. Mertens, Dmitri I. Svergun, Junyu Xiao, Yan Zhang, Jia-huai Wang, Rob Meijers Published in: Neuron, Issue 97/6, 2018, Page(s) 1261-1267.e4, ISSN 0896-6273 Publisher: Cell Press DOI: 10.1016/j.neuron.2018.02.010 Control of mechanical pain hypersensitivity in mice through ligand-targeted photoablation of TrkB-positive sensory neurons Author(s): Rahul Dhandapani, Cynthia Mary Arokiaraj, Francisco J. Taberner, Paola Pacifico, Sruthi Raja, Linda Nocchi, Carla Portulano, Federica Franciosa, Mariano Maffei, Ahmad Fawzi Hussain, Fernanda de Castro Reis, Luc Reymond, Emerald Perlas, Simone Garcovich, Stefan Barth, Kai Johnsson, Stefan G. Lechner, Paul A. Heppenstall Published in: Nature Communications, Issue 9/1, 2018, Page(s) 1640, ISSN 2041-1723 Publisher: Nature Publishing Group DOI: 10.1038/s41467-018-04049-3 Topology and enzymatic properties of a canonical Polycomb repressive complex 1 isoform Author(s): Matteo Colombo, Ombeline Pessey, Marco Marcia Published in: FEBS Letters, Issue 593/14, 2019, Page(s) 1837-1848, ISSN 0014-5793 Publisher: Elsevier BV DOI: 10.1002/1873-3468.13442 Genomic Rewiring of SOX2 Chromatin Interaction Network during Differentiation of ESCs to Postmitotic Neurons Author(s): Daria Bunina, Nade Abazova, Nichole Diaz, Kyung-Min Noh, Jeroen Krijgsveld, Judith B. Zaugg Published in: Cell Systems, Issue 10/6, 2020, Page(s) 480-494.e8, ISSN 2405-4712 Publisher: Cell Press DOI: 10.1016/j.cels.2020.05.003 Properties of structural variants and short tandem repeats associated with gene expression and complex traits Author(s): David Jakubosky, Matteo D’Antonio, Marc Jan Bonder, Craig Smail, Margaret K. R. Donovan, William W. Young Greenwald, Hiroko Matsui, Agnieszka D’Antonio-Chronowska, Oliver Stegle, Erin N. Smith, Stephen B. Montgomery, Christopher DeBoever, Kelly A. Frazer Published in: Nature Communications, Issue 11/1, 2020, Page(s) 2927, ISSN 2041-1723 Publisher: Nature Publishing Group DOI: 10.1038/s41467-020-16482-4 Real-time 3D single-molecule localization using experimental point spread functions Author(s): Yiming Li, Markus Mund, Philipp Hoess, Joran Deschamps, Ulf Matti, Bianca Nijmeijer, Vilma Jimenez Sabinina, Jan Ellenberg, Ingmar Schoen, Jonas Ries Published in: Nature Methods, Issue 15/5, 2018, Page(s) 367-369, ISSN 1548-7091 Publisher: Nature Publishing Group DOI: 10.1038/nmeth.4661 Lumen Expansion Facilitates Epiblast-Primitive Endoderm Fate Specification during Mouse Blastocyst Formation Author(s): Allyson Quinn Ryan, Chii Jou Chan, François Graner, Takashi Hiiragi Published in: Developmental Cell, Issue 51/6, 2019, Page(s) 684-697.e4, ISSN 1534-5807 Publisher: Cell Press DOI: 10.1016/j.devcel.2019.10.011 A Tug-of-War between Cell Shape and Polarity Controls Division Orientation to Ensure Robust Patterning in the Mouse Blastocyst Author(s): Ritsuya Niwayama, Prachiti Moghe, Yan-Jun Liu, Dimitri Fabrèges, Frank Buchholz, Matthieu Piel, Takashi Hiiragi Published in: Developmental Cell, Issue 51/5, 2019, Page(s) 564-574.e6, ISSN 1534-5807 Publisher: Cell Press DOI: 10.1016/j.devcel.2019.10.012 Nanoscale subcellular architecture revealed by multicolor three-dimensional salvaged fluorescence imaging Author(s): Yongdeng Zhang, Lena K. Schroeder, Mark D. Lessard, Phylicia Kidd, Jeeyun Chung, Yuanbin Song, Lorena Benedetti, Yiming Li, Jonas Ries, Jonathan B. Grimm, Luke D. Lavis, Pietro De Camilli, James E. Rothman, David Baddeley, Joerg Bewersdorf Published in: Nature Methods, Issue 17/2, 2020, Page(s) 225-231, ISSN 1548-7091 Publisher: Nature Publishing Group DOI: 10.1038/s41592-019-0676-4 Yeast Creates a Niche for Symbiotic Lactic Acid Bacteria through Nitrogen Overflow Author(s): Olga Ponomarova 1 , Natalia Gabrielli 1 , Daniel C Sévin 2 , Michael Mülleder 3 , Katharina Zirngibl 1 , Katsiaryna Bulyha 1 , Sergej Andrejev 1 , Eleni Kafkia 1 , Athanasios Typas 1 , Uwe Sauer 2 , Markus Ralser 3 , Kiran Raosaheb Patil Published in: Cell System, Issue 2017 Oct 25;5(4):345-357.e6. doi: 10.1016/j.cels.2017.09.002. Epub 2017 Sep 27., 2017, Page(s) 2017 Oct 25;5(4):345-357.e6. doi: 10.1016/j.cels.2017.09.002. Epub 2017 Sep 27., ISSN 2405-4720 Publisher: Elsevier DOI: 10.1016/j.cels.2017.09.002 Depth-dependent PSF calibration and aberration correction for 3D single-molecule localization Author(s): Yiming Li, Yu-Le Wu, Philipp Hoess, Markus Mund, Jonas Ries Published in: Biomedical Optics Express, Issue 10/6, 2019, Page(s) 2708, ISSN 2156-7085 Publisher: The Optical Society DOI: 10.1364/boe.10.002708 Proteasomes tether to two distinct sites at the nuclear pore complex. Author(s): Sahradha Albert,a Miroslava Schaffer,a Florian Beck,a Shyamal Mosalaganti,b Shoh Asano,a,1 Henry F. Thomas,a Jürgen M. Plitzko,a Martin Beck,b Wolfgang Baumeister,a,2 and Benjamin D. Engela, Beck M2, Baumeister W3, Benjamin D Engel Department of Molecular Structural Biology, Max Planck Institute of Biochemistry, 82152 Martinsried, Germany; baumeist@biochem.mpg.de baumeist@biochem.mpg.de Published in: Proceedings of the National Academy of Sciences of the United States of America, Issue 114(52):13726-13731, 2017, Page(s) 114(52):13726-13731, ISSN 0027-8424 Publisher: National Academy of Sciences DOI: 10.1073/pnas.1716305114 A General Small-Angle X-ray Scattering-Based Screening Protocol Validated for Protein-RNA Interactions Author(s): Chen PC1, Masiewicz P1, Rybin V1, Svergun D2, Hennig J1 Published in: ACS Combinataorial Science, Issue 23 Mar 2018, 2018, Page(s) 20(4):197-202, ISSN 2156-8944 Publisher: American Chemical Society DOI: 10.1021/acscombsci.8b00007 Second-Shell Basic Residues Expand the Two-Metal-Ion Architecture of DNA and RNA Processing Enzymes Author(s): Vito Genna,1,4 Matteo Colombo,2,4 Marco De Vivo,1,3,* and Marco Marcia2,5,** Published in: Structure, Issue 2018 Jan 2; 26(1): 40–50.e2., 2018, Page(s) 2018 Jan 2; 26(1): 40–50.e2., ISSN 0969-2126 Publisher: Elsevier DOI: 10.1016/j.str.2017.11.008 Structural and functional characterization of the severe fever with thrombocytopenia syndrome virus L protein Author(s): Dominik Vogel, Sigurdur Rafn Thorkelsson, Emmanuelle R J Quemin, Kristina Meier, Tomas Kouba, Nadja Gogrefe, Carola Busch, Sophia Reindl, Stephan Günther, Stephen Cusack, Kay Grünewald, Maria Rosenthal Published in: Nucleic Acids Research, Issue 48/10, 2020, Page(s) 5749-5765, ISSN 0305-1048 Publisher: Oxford University Press DOI: 10.1093/nar/gkaa253 Debugging Eukaryotic Genetic Code Expansion for Site-Specific Click-PAINT Super-Resolution Microscopy Author(s): Ivana Nikić, Gemma Estrada Girona, Jun Hee Kang, Giulia Paci, Sofya Mikhaleva, Christine Koehler, Nataliia V. Shymanska, Camilla Ventura Santos, Daniel Spitz, Edward A. Lemke Published in: Angewandte Chemie International Edition, Issue 55/52, 2016, Page(s) 16172-16176, ISSN 1433-7851 Publisher: John Wiley & Sons Ltd. DOI: 10.1002/anie.201608284 Molecular architecture of the inner ring scaffold of the human nuclear pore complex Author(s): J. Kosinski, S. Mosalaganti, A. von Appen, R. Teimer, A. L. DiGuilio, W. Wan, K. H. Bui, W. J. H. Hagen, J. A. G. Briggs, J. S. Glavy, E. Hurt, M. Beck Published in: Science, Issue 352/6283, 2016, Page(s) 363-365, ISSN 0036-8075 Publisher: American Association for the Advancement of Science DOI: 10.1126/science.aaf0643 Structural impact of K63 ubiquitin on yeast translocating ribosomes under oxidative stress Author(s): Ye Zhou, Panagiotis L. Kastritis, Shannon E. Dougherty, Jonathan Bouvette, Allen L. Hsu, Laura Burbaum, Shyamal Mosalaganti, Stefan Pfeffer, Wim J. H. Hagen, Friedrich Förster, Mario J. Borgnia, Christine Vogel, Martin Beck, Alberto Bartesaghi, Gustavo M. Silva Published in: Proceedings of the National Academy of Sciences, Issue 117/36, 2020, Page(s) 22157-22166, ISSN 0027-8424 Publisher: National Academy of Sciences DOI: 10.1073/pnas.2005301117 In situ architecture of the algal nuclear pore complex Author(s): Shyamal Mosalaganti, Jan Kosinski, Sahradha Albert, Miroslava Schaffer, Daniela Strenkert, Patrice A. Salomé, Sabeeha S. Merchant, Jürgen M. Plitzko, Wolfgang Baumeister, Benjamin D. Engel, Martin Beck Published in: Nature Communications, Issue 9/1, 2018, Page(s) 2361, ISSN 2041-1723 Publisher: Nature Publishing Group DOI: 10.1038/s41467-018-04739-y Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression Author(s): Anna S. E. Cuomo, Daniel D. Seaton, Davis J. McCarthy, Iker Martinez, Marc Jan Bonder, Jose Garcia-Bernardo, Shradha Amatya, Pedro Madrigal, Abigail Isaacson, Florian Buettner, Andrew Knights, Kedar Nath Natarajan, Ludovic Vallier, John C. Marioni, Mariya Chhatriwala, Oliver Stegle Published in: Nature Communications, Issue 11/1, 2020, Page(s) 810, ISSN 2041-1723 Publisher: Nature Publishing Group DOI: 10.1038/s41467-020-14457-z Nuclear pores as versatile reference standards for quantitative superresolution microscopy Author(s): Jervis Vermal Thevathasan, Maurice Kahnwald, Konstanty Cieśliński, Philipp Hoess, Sudheer Kumar Peneti, Manuel Reitberger, Daniel Heid, Krishna Chaitanya Kasuba, Sarah Janice Hoerner, Yiming Li, Yu-Le Wu, Markus Mund, Ulf Matti, Pedro Matos Pereira, Ricardo Henriques, Bianca Nijmeijer, Moritz Kueblbeck, Vilma Jimenez Sabinina, Jan Ellenberg, Jonas Ries Published in: Nature Methods, Issue 16/10, 2019, Page(s) 1045-1053, ISSN 1548-7091 Publisher: Nature Publishing Group DOI: 10.1038/s41592-019-0574-9 Population-scale proteome variation in human induced pluripotent stem cells Author(s): Bogdan Andrei Mirauta, Daniel D Seaton, Dalila Bensaddek, Alejandro Brenes, Marc Jan Bonder, Helena Kilpinen, Chukwuma A Agu, Alex Alderton, Petr Danecek, Rachel Denton, Richard Durbin, Daniel J Gaffney, Angela Goncalves, Reena Halai, Sarah Harper, Christopher M Kirton, Anja Kolb-Kokocinski, Andreas Leha, Shane A McCarthy, Yasin Memari, Minal Patel, Ewan Birney, Francesco Paolo Casale, Laura Clark Published in: eLife, Issue 9, 2020, Page(s) e57390, ISSN 2050-084X Publisher: eLife Sciences Publications DOI: 10.7554/elife.57390 Ab Initio Prediction of NMR Spin Relaxation Parameters from Molecular Dynamics Simulations Author(s): Po-chia Chen, Maggy Hologne, Olivier Walker, Janosch Hennig Published in: Journal of Chemical Theory and Computation, Issue 14/2, 2018, Page(s) 1009-1019, ISSN 1549-9618 Publisher: American Chemical Society DOI: 10.1021/acs.jctc.7b00750 Non-peer reviewed articles (2) The role of small-angle scattering in structure-based screening applications Author(s): Po-chia Chen, Janosch Hennig Published in: Biophysical Reviews, Issue 10/5, 2018, Page(s) 1295-1310, ISSN 1867-2450 Publisher: Springer Verlag DOI: 10.1007/s12551-018-0464-x Revisiting the role of metabolism during development Author(s): Hidenobu Miyazawa, Alexander Aulehla Published in: Development, Issue 145/19, 2018, Page(s) dev131110, ISSN 0950-1991 Publisher: The Company of Biologists Ltd. DOI: 10.1242/dev.131110 Searching for OpenAIRE data... There was an error trying to search data from OpenAIRE No results available
