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CORDIS

Technologies of the Future for Low-Cost Enzymes for Environment-Friendly Products

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Online web tool for performing HMM searches (opens in new window)

This deliverable will consist in an online semi-automatic web tool for performing Hidden-Markov-Model (HMM) seach for sequences of interest. More in details, will consist in a publicly available user-friendly and open-source semi-automatic informatic tool for screening, through Hidden-Markov-Model (HMM) searches, full lenght chain sequences encoding enzymes relevant to FuturEnzyme from public repositories. The tool will be accompanied by a report detailing the functioning of the tool and the scores, e-values, sequence identities, sequence coverages, etc., applied.

Inter-consortia policy brief (opens in new window)

This deliverable will consist in a Policy Brief through which to draft policy advices in which members of different consortia agreed. This material will be available through the website.

Two divulgative/promotional articles in scientific magazines (opens in new window)

This deliverable will consist in two articles published in two non-Science Citation Index scientific magazines with broad audience among SMEs and industries operating in the biotech sector (also scientific and academic community). This material will be available through the website.

Visual identity guidelines (opens in new window)

This deliverable will consist in a series of visual elements to create distinction and a strong visual identity for the FuturEnzyme project as well as template for presentations posters and reports

FuturEnzyme website (opens in new window)

This deliverable will consist in an open website to assure communication towards the outside world that will be maintained and regularly updated throughout the project The website will serve as the main interface for distributing project information and results as elaborated in all WPs

Newsdigest, posters, bulletins (opens in new window)

This deliverable will consist in a series of newsdigests, posters, and bulletins for disseminating and communicating Project objectives and outcomes for SMEs and industries operating in the biotech sector (also scientific and academic community). This material will be available through the website.

FuturEnzyme project leaflet and brochure (opens in new window)

This deliverable will consist in a series of leaflet and brochure materials for disseminating and communicating Project objectives and outcomes for consumers policymakers This material will be available through the website

Online predictive web tool to search enzymes with manufacturers' specifications (opens in new window)

This deliverable will consist in a publicly available user-friendly and open-source online technology that, through integrating motif descriptors and big datasets, allow screening in time frames as short as seconds, full lenght chain sequences encoding enzymes that meet the key performance indicators of the detergent, textile and cosmetic manufacturing sectors. The tool will be accompanied by a report detailing the functioning of the tool and the description of motifs and descriptors on the basis of which it works.

Short promo video/comic (opens in new window)

This deliverable will consist in at least one short promo video and a comic to maximize the FuturEnzyme dissemination, exploitation and communication impact towards a broad audience. This material will be available through the website.

Science, Consumer, Policy Briefs: research focus (opens in new window)

This deliverable will consist in a series of Science, Consumer, Policy Briefs through which to draft individual and common scientific, market, consumer, social, and policy advices within the consortium and in collaboration with other consortia. This material will be available through the website.

Report on project results and lessons learned (opens in new window)

This deliverable will consist in a report informing about the overall success of the new enzymes and enzymatic processes to produce environmentally-friendly consumer products and how they may help producing similar or other products with environmental benefits.

Report on one consumer survey and product testing and brief (opens in new window)

This deliverable will consist in a report and a brief summarizing the outcomes of the consurmer surveys and product testa performed in the project to understand the acceptability of the new enzyme-based products. This material will be available through the website.

Report on public relation activities and events (opens in new window)

This deliverable will consist in a report listing all public relation toolkits available to the consortium to support the implementation of the Dissemination and Communication Strategy, to raise awareness of the work, progress and achievements of the FuturEnzyme project (e.g. enzymes, processes, and products developed, and the high-tech enzyme development platform), and the positive societal implications of these. The report will also summarize the visits/talks in secondary school and University, dialogues and face by face talks, assistance to open days, exhibitions and tours (in science festivals, etc.), scientific seminars, conferences and workshops and other social events to which consortium partners have participated. The report on the public inter-consortia event to be organized with consortia of other funded projects will be included.

Publications

Improving bioprocess conditions for the production of prodigiosin using a marine Serratia rubidaea strain (opens in new window)

Author(s): Ricardo F. S. Pereira, Carla C. C. R. de Carvalho
Published in: Marine Drugs, Issue 22(4), 2024, Page(s) 142, ISSN 1660-3397
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/md22040142

Metagenomic mining for esterases in the microbial community of Los Rueldos acid mine drainage formation (opens in new window)

Author(s): Paula Vidal, Mónica Martínez-Martínez, Laura Fernandez-Lopez, Sergi Roda, Celia Méndez-García, Olga V. Golyshina, Víctor Guallar, Ana I. Peláez, Manuel Ferrer
Published in: Frontiers in Microbiology, Issue Volume 13, 2022, Page(s) 868839, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2022.868839

An archaeal lid-containing feruloyl esterase degrades polyethylene terephthalate (opens in new window)

Author(s): Perez-Garcia, Pablo; Chow, Jennifer; Costanzi, Elisa; Gurschke, Marno; Dittrich, Jonas; Dierkes, Robert F.; Molitor, Rebecka; Applegate, Violetta; Feuerriegel, Golo; Tete, Prince; Danso, Dominik; Thies, Stephan; Schumacher, Julia; Pfleger, Christopher; Jaeger, Karl-Erich; Gohlke, Holger; Smits, Sander H. J.; Schmitz, Ruth A.; Streit, Wolfgang R.
Published in: Communications Chemistry, Issue 6, 2023, Page(s) 193, ISSN 2399-3669
Publisher: Nature Portfolio
DOI: 10.1038/s42004-023-00998-z

A Choice Experiment Model for Sustainable Consumer Goods: A Systematic Literature Review and Workflow Design (opens in new window)

Author(s): Saija, Maria Elena; Daniotti, Sara; Bosco, Diego; Re, Ilaria
Published in: A Choice Experiment Model for Sustainable Consumer Goods: A Systematic Literature Review and Workflow Design, Issue 15, 2023, Page(s) 13183, ISSN 2071-1050
Publisher: MDPI Open Access Publishing
DOI: 10.3390/su151713183

Process Development for Benzyl Alcohol Production by Whole-Cell Biocatalysis in Stirred and Packed Bed Reactors (opens in new window)

Author(s): Carlos Rodrigues; Carla De Carvalho
Published in: Microorganisms, Issue Volume 10; Issue 5, 2022, Page(s) 966, ISSN 2076-2607
Publisher: MDPI
DOI: 10.3390/microorganisms10050966

A novel metagenome-derived viral RNA polymerase and its application in a cell-free expression system for metagenome screening (opens in new window)

Author(s): Yuchen Han, Birhanu M. Kinfu, Fabian Blombach, Gwenny Cackett, Hongli Zhang, Pablo Pérez‑García, Ines Krohn, Jesper Salomon, Volkan Besirlioglu, Tayebeh Mirzaeigarakani, Ulrich Schwaneberg, Jennifer Chow, Finn Werner, Wolfgang R. Streit
Published in: Scientific Reports, Issue Volume 12, 2022, Page(s) 17882, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-022-22383-x

Design and Characterization of In-One Protease-Esterase PluriZyme (opens in new window)

Author(s): Fernandez-Lopez, Laura; Roda, Sergi; Gonzalez-Alfonso, José L; Plou, Francisco J; Guallar, Víctor; Ferrer, Manuel
Published in: International Journal of Molecular Sciences, Issue Volume 23, Issue 21, 2022, Page(s) 13337, ISSN 1422-0067
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms232113337

Exploring the Potential of Various Cyclodextrin‐Based Derivatives in Enzyme Supramolecular Engineering (opens in new window)

Author(s): Ali Foroutan Kalourazi, Seyed Amirabbas Nazemi, Ajmal Roshan Unniram Parambil, Manuel Ferrer, S. Shirin Shahangian, Patrick Shahgaldian
Published in: ChemBioChem, 2024, Page(s) e202400840, ISSN 1439-4227
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/cbic.202400840

The perennially ice-covered Lake Enigma, Antarctica supports unique microbial communities (opens in new window)

Author(s): Francesco Smedile, Violetta La Cono, Stefano Urbini, Giovanni Benedetti, Gina La Spada, Francesca Crisafi, Maurizio Azzaro, Nunziatina Porcino, Stefano Fazi, Stefano Amalfitano, Franco Tassi, Orlando Vaselli, Stefania Venturi, Michael T. Madigan, John E. Hallsworth, Michail M. Yakimov
Published in: Communications Earth & Environment, Issue 5, 2024, Page(s) 741, ISSN 2662-4435
Publisher: Springer Nature
DOI: 10.1038/s43247-024-01842-5

Plasmonic photothermal activation of an organosilica shielded cold-adapted lipase coimmobilised with gold nanoparticles on silica particles (opens in new window)

Author(s): Giunta, Carolina I; Nazemi, Seyed Amirabbas; Olesinska, Magdalena; Shahgaldian, Patrick
Published in: Nanoscale Advances, Issue 5, 2023, Page(s) 81-87, ISSN 2516-0230
Publisher: Royal Society of Chemistry
DOI: 10.1039/d2na00605g

Enhancing the Hydrolytic Activity of a Lipase towards Larger Triglycerides through Lid Domain Engineering (opens in new window)

Author(s): Fernandez-Lopez, Laura; Roda, Sergi; Robles-Martín, A; Muñoz-Tafalla, Rubén; Almendral, David; Ferrer, Manuel; Guallar, Víctor
Published in: International Journal of Molecular Sciences, Issue 24, 2023, Page(s) 18, ISSN 1422-0067
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms241813768

Sub-micro- and nano-sized polyethylene terephthalate deconstruction with engineered protein nanopores (opens in new window)

Author(s): Robles-Martín, Ana; Amigot-Sánchez, Rafael; Fernandez-Lopez, Laura; Gonzalez-Alfonso, Jose L; Roda, Sergi; Alcolea-Rodriguez, Víctor; Heras-Márquez, Diego; Almendral, David; Coscolín, Cristina; Plou, Francisco J; Portela, Raquel; Bañares, Miguel A; Martínez-del-Pozo, Álvaro; García-Linares, Sara; Ferrer, Manuel; Guallar, Víctor
Published in: Nature Catalysis, Issue 6, 2023, Page(s) 174–1185, ISSN 2520-1158
Publisher: Nature Portfolio
DOI: 10.1038/s41929-023-01048-6

Natranaeroarchaeum sulfidigenes gen. nov., sp. nov., carbohydrate-utilizing sulfur-respiring haloarchaeon from hypersaline soda lakes, a member of a new family Natronoarchaeaceae fam. nov. in the order Halobacteriales (opens in new window)

Author(s): Dimitry Y. Sorokin, Michail Yakimov, Enzo Messina, Alexander Y. Merkel, Michel Koenen, Nicole J. Bale, Jaap S. Sinninghe Damsté
Published in: ystematic and Applied Microbiology, Issue Volume 45, 2022, Page(s) 126356, ISSN 0723-2020
Publisher: Elsevier BV
DOI: 10.1016/j.syapm.2022.126356

Increased Thermostability of an Engineered Flavin-Containing Monooxygenase to Remediate Trimethylamine in Fish Protein Hydrolysates (opens in new window)

Author(s): Goris, Marianne; Cea-Rama, Isabel; Puntervoll, Pål; Ree, Rasmus; Almendral, David; Sanz-Aparicio, Julia; Ferrer, Manuel; Bjerga, Gro Elin Kjæreng
Published in: Applied and Environmental Microbiology, Issue 2, 2023, ISSN 0099-2240
Publisher: American Society for Microbiology
DOI: 10.1128/aem.00390-23

Anaerobic carboxydotrophy in sulfur-respiring haloarchaea from hypersaline lakes (opens in new window)

Author(s): Dimitry Y. Sorokin, Alexander Y. Merkel, Enzo Messina, Claudia Tugui, Martin Pabst, Peter N. Golyshin & Michail M. Yakimov 
Published in: The ISME Journal, Issue Volume 16, 2022, Page(s) 1534–1546, ISSN 1751-7362
Publisher: Nature Publishing Group
DOI: 10.1038/s41396-022-01206-x

Exploiting cyclodextrins as artificial chaperones to enhance enzyme protection through supramolecular engineering (opens in new window)

Author(s): Foroutan Kalourazi, Ali; Amirabbas Nazemi, Seyed; Unniram Parambi, Ajmal Roshan; Muñoz-Tafalla, Ruben; Vidal, Paula; Shahangian, S. Shirin; Guallar, Víctor; Ferrer, Manuel; Shahgaldian, Patrick
Published in: Nanoscale, Issue 16, 2024, Page(s) 5123-5129, ISSN 2040-3372
Publisher: The Royal Society of Chemistry
DOI: 10.1039/D3NR06044F

Isolation and Characterization of a Serratia rubidaea from a Shallow Water Hydrothermal Vent (opens in new window)

Author(s): Pereira, Ricardo F. S.; Ferreira, Maria J.; Oliveira, M. Conceição; Serra, Maria C.; de Carvalho, Carla C. C. R.
Published in: Marine Drugs, Issue 21, 2023, Page(s) 599, ISSN 1660-3397
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/md21120599

Halopseudomonas species: Cultivation and molecular genetic tools (opens in new window)

Author(s): Kruse, Luzie; Loeschcke, Anita; de Witt, Jan; Wierckx, Nick; Jaeger, Karl-Erich; Thies, Stephan
Published in: Microbial Biotechnology, Issue 17, 2024, Page(s) e14369, ISSN 1751-7915
Publisher: Wiley
DOI: 10.1111/1751-7915.14369

Lipid- and Multivariate-Based Analyses to Determine Cell Response to pH Variations and Buffer Composition (opens in new window)

Author(s): Ricardo F. S. Pereira, Carla C. C. R. de Carvalho
Published in: Marine Biotechnology, Issue 27, 2025, Page(s) 48, ISSN 1436-2228
Publisher: Springer Verlag
DOI: 10.1007/s10126-025-10421-4

Calm and Frenzy: marine obligate hydrocarbonoclastic bacteria sustain ocean wellness (opens in new window)

Author(s): Michail M. Yakimov; Rafael Bargiela; Peter N. Golyshin
Published in: Current Opinion in Biotechnology, Issue Volume 73, 2022, Page(s) 337-345, ISSN 0958-1669
Publisher: Elsevier BV
DOI: 10.1016/j.copbio.2021.09.015

Unlocking a Key Residue in a Lipase for Efficient Polyethylene Terephthalate (PET) Hydrolysis and Influencing Depolymerization Product Profiles (opens in new window)

Author(s): Paula Vidal, Ana Robles‐Martín, Laura Fernandez‐Lopez, Jose L. Gonzalez‐Alfonso, David Almendral, Ruben Muñoz‐Tafalla, Francisco J. Plou, Víctor Guallar, Manuel Ferrer
Published in: ChemCatChem, Issue 16, 2024, Page(s) e202400765, ISSN 1867-3880
Publisher: Wiley - VCH Verlag GmbH & CO. KGaA
DOI: 10.1002/cctc.202400765

Crystal structure of a family VIII β-lactamase fold hydrolase reveals the molecular mechanism for its broad substrate scope (opens in new window)

Author(s): Isabel Cea-Rama, Cristina Coscolín, Jose L. Gonzalez-Alfonso, Jog Raj, Marko Vasiljević, Francisco J. Plou, Manuel Ferrer, Julia Sanz-Aparicio
Published in: FEBS Journal, Issue Volume 289, Issue 21, 2022, Page(s) 6714-6730, ISSN 1742-464X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/febs.16554

Transforming an esterase into an enantioselective catecholase through bioconjugation of a versatile metal-chelating inhibitor (opens in new window)

Author(s): Fernandez-Lopez, Laura; Cea-Rama, Isabel; Alvarez-Malmagro, Julia; Ressmann, Anna K; Gonzalez-Alfinso, Jose Luis; Coscolín, Cristina; Shahgaldian, Patrick; Plou, Francisco J; Modregger, Jan; Pita, Marcos; Sanz-Aparicio, Julia; Ferrer, Manuel
Published in: Chemical Communications, Issue 1, 2023, ISSN 1359-7345
Publisher: Royal Society of Chemistry
DOI: 10.1039/D3CC01946B

Thermophilic carboxylesterases from hydrothermal vents of the volcanic island of Ischia active on synthetic and biobased polymers and mycotoxins (opens in new window)

Author(s): Distaso, Marco; Chernikova, Tatyana; Bargiela, Rafael; Coscolín, Cristina; Stogios, Peter; Gonzalez-Alfonso, Jose L; Lemak, Sofia; Khusnutdinova, Anna; Plou, Francisco J; Evdokimova, Elena; Savchenko, Alexei; Lunev, Evgenii A; Yakimov, Michail M; Golyshina, Olga; Ferrer, Manuel; Yakunin, Alexander F; Golyshin, Peter N
Published in: Applied and Environmental Microbiology, 2023, ISSN 0099-2240
Publisher: American Society for Microbiology
DOI: 10.1101/2022.09.17.508236

AsiteDesign: a Semirational Algorithm for an Automated EnzymeDesign (opens in new window)

Author(s): Roda, Sergi; Terholsen, Henrik; Heike Meyer, Jule Ruth; Cañellas-Solé, Albert; Guallar, Víctor; Bornscheuer, Uwe; Kazemi, Masoud
Published in: The Journal of Physical Chemistry B, Issue 127, 2023, Page(s) 2661−2670, ISSN 1520-6106
Publisher: American Chemical Society
DOI: 10.1021/acs.jpcb.2c07091

The metagenome-derived esterase PET40 is highlypromiscuous and hydrolyses polyethyleneterephthalate (PET) (opens in new window)

Author(s): Zhang, Hongli; Dierkes, Robert F.; Perez-Garcia, Pablo; Costanzi, Elisa; Dittrich, Jonas; Cea, Pablo A.; Gurschke, Marno; Applegate, Violetta; Partus, Kristina; Schmeisser, Christel; Pfleger, Christopher; Gohlke, Holger; Smits, Sander H. J.; Jennifer Chow; Wolfgang R. Streit
Published in: The FEBS Journal, 2023, ISSN 1742-464X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/febs.16924

EP-Pred: A Machine Learning Tool for Bioprospecting Promiscuous Ester Hydrolases (opens in new window)

Author(s): Xiang, R; Fernandez-Lopez, Laura; Robles-Martín, Ana; Ferrer, Manuel; Guallar, Víctor
Published in: Biomolecules, Issue Volume 12, issue 10, 2022, Page(s) 1529, ISSN 2218-273X
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/biom12101529

Interplay of intracellular and trans-cellular DNA methylation in natural archaeal consortia (opens in new window)

Author(s): Reva, Oleg N.; La Cono, Violetta; Crisafi, Francesca; Smedile, Francesco; Mudaliyar, Manasi; Ghosal, Debnath; Giuliano, Laura; Krupovic, Mart; Yakimov, Michail M.
Published in: Environmental Microbiology Reports, Issue 16, 2024, Page(s) e13258, ISSN 1758-2229
Publisher: Wiley-Blackwell
DOI: 10.1111/1758-2229.13258

A Plurizyme with Transaminase and Hydrolase Activity Catalyzes Cascade Reactions (opens in new window)

Author(s): Sergi Roda, Laura Fernandez-Lopez, Marius Benedens, Alexander Bollinger, Stephan Thies, Julia Schumacher, Cristina Coscolín, Masoud Kazemi, Gerard Santiago, Christoph G. W. Gertzen, Jose L. Gonzalez-Alfonso, Francisco J. Plou, Karl-Erich Jaeger, Sander H. J. Smits, Manuel Ferrer, Víctor Guallar
Published in: Angewandte Chemie International Edition, Issue Volume 61, Issue 37, 2022, Page(s) e202207344, ISSN 1433-7851
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/anie.202207344

Mimicking Marine Conditions to Improve Prodigiosin Yields in Bioreactor (opens in new window)

Author(s): Ricardo F. S. Pereira, Carla C. C. R. de Carvalho
Published in: Processes, Issue 12, 2024, Page(s) 1794, ISSN 2227-9717
Publisher: MDPI
DOI: 10.3390/pr12091794

Polyesterase activity is widespread in the family IV carboxylesterases from bacteria (opens in new window)

Author(s): Hairong Ma, Anna N. Khusnutdinova, Sofia Lemak, Tatyana N. Chernikova, Olga V. Golyshina, David Almendral, Manuel Ferrer, Peter N. Golyshin, Alexander F. Yakunin
Published in: Journal of Hazardous Materials, Issue 481, 2024, Page(s) 136540, ISSN 0304-3894
Publisher: Elsevier BV
DOI: 10.1016/j.jhazmat.2024.136540

Computationally guided genome rewiring of Escherichia coli and its application for nanopolyethylene terephthalate (PET) biodegradation and upcycling (opens in new window)

Author(s): Paula Vidal, Joan Giménez-Dejoz, Laura Fernandez-Lopez, Sonia Romero, Seyed Amirabbas Nazemi, Miguel Luengo, Jose L. Gonzalez-Alfonso, Mireia Martinez-Sugrañes, Ana Robles-Martín, David Almendral, Sergi Roda, Pablo Pérez-García, Luzie Kruse, Karl-Erich Jaeger, Wolfgang R. Streit, Francisco J. Plou, Martin Floor, Patrick Shahgaldian, Rafael Bargiela, Víctor Guallar, Manuel Ferrer
Published in: Trends in Biotechnology, 2025, ISSN 0167-7799
Publisher: Elsevier BV
DOI: 10.1016/j.tibtech.2025.07.008

Cultivation of a vampire: ‘Candidatus Absconditicoccus praedator’ (opens in new window)

Author(s): Michail M. Yakimov; Alexander Y. Merkel; Vasil A. Gaisin; Martin Pilhofer; Enzo Messina; John E. Hallsworth; Alexandra A. Klyukina; Ekaterina N. Tikhonova; Vladimir M. Gorlenko
Published in: Environmental Microbiology, Issue Volume 24, Issue 1, 2021, Page(s) 30-49, ISSN 1462-2920
Publisher: Wiley-Blackwell
DOI: 10.1111/1462-2920.15823

Enzymes for consumer products to achieve climate neutrality (opens in new window)

Author(s): Molina-Espeja, Patricia; Sanz-Aparicio, Julia; Golyshin, Peter N; Robles-Martín, Ana; Guallar, Victor; Beltrametti, Fabrizio; Müller, Markus; Yakimov, Mikhail; Modregger, Jan; van Logchem, Moniec; Corvini, Philippe; Shahgaldian, Patrick; Degering, Christian; Wieland, Susanne; Timm, Anne; de Carvalho, Carla CCR; Ilaria, Re; Daniotti, Sara; Thies, Stephan; Jaeger, Karl-Erich; Chow, Jennifer; Strei
Published in: Oxford Open Climate Change, Issue 3, 2023, Page(s) kgad003, ISSN 2634-4068
Publisher: Oxford University Press
DOI: 10.1093/oxfclm/kgad003

DPANN symbiont of Haloferax volcanii accelerates xylan degradation by the non-host haloarchaeon Halorhabdus sp. (opens in new window)

Author(s): Oleg N. Reva, Violetta La Cono, Laura Marturano, Francesca Crisafi, Francesco Smedile, Manasi Mudaliyar, Debnath Ghosal, Elena A. Selivanova, Marina E. Ignatenko, Manuel Ferrer, Laura Fernandez-Lopez, Mart Krupovic, Michail M. Yakimov
Published in: iScience, Issue 28, 2025, Page(s) 111749, ISSN 2589-0042
Publisher: Elsevier BV
DOI: 10.1016/j.isci.2025.111749

Assessing European Consumers’ Willingness to Pay for Sustainable Laundry Detergents: A Choice Experiment Approach (opens in new window)

Author(s): Maria Elena Saija, Sara Daniotti
Published in: Sustainability, Issue 17, 2025, Page(s) 3365, ISSN 2071-1050
Publisher: MDPI Open Access Publishing
DOI: 10.3390/su17083365

The mobility of the cap domain is essential for the substrate promiscuity of a family IV esterase from sorghum rhizosphere microbiome (opens in new window)

Author(s): Distaso, Marco; Cea-Rama, Isabel; Coscolín, Cristina; Chernikova, Tatyana; Tran, Hai; Ferrer, Manuel; Sanz-Aparicio, Julia; Golyshin, Peter
Published in: Applied and Environmental Microbiology, 2023, ISSN 0099-2240
Publisher: American Society for Microbiology
DOI: 10.1128/aem.01807-22

Nanohaloarchaea as beneficiaries of xylan degradation by haloarchaea (opens in new window)

Author(s): La Cono, Violetta; Messina, Enzo; Reva, Olga; Smedile, Francesco; La Spada, Gina; Crisafi, Francesca; Marturano, Laura; Miguez, Noa; Ferrer, Manuel; Selivanova, Elena A; Golyshina, Olga V; Golyshin, Peter N; Rohde, Manfred; Krupovic, Mart; Merkel, Alexander Y; Sorokin, Dimitry Y; Hallsworth, John E; Yakimov, Michail M
Published in: Microbial Biotechnology, 2023, ISSN 1751-7915
Publisher: Wiley-Blackwell
DOI: 10.1111/1751-7915.14272

Moderately thermostable GH1 β-glucosidases from hyperacidophilic archaeon <i>Cuniculiplasma divulgatum</i> S5 (opens in new window)

Author(s): Anna N Khusnutdinova, Hai Tran, Saloni Devlekar, Marco A Distaso, Ilya V Kublanov, Tatiana Skarina, Peter Stogios, Alexei Savchenko, Manuel Ferrer, Olga V Golyshina, Alexander F Yakunin, Peter N Golyshin
Published in: FEMS Microbiology Ecology, Issue 100, 2024, Page(s) fiae114, ISSN 1574-6941
Publisher: Oxford Academic
DOI: 10.1093/femsec/fiae114

Halapricum desulfuricans sp. nov., carbohydrate-utilizing, sulfur-respiring haloarchaea from hypersaline lakes (opens in new window)

Author(s): Dimitry Y. Sorokin, Michail M. Yakimov, Enzo Messina, Alexander Y. Merkel, Michel Koenen, Nicole J. Bale, Jaap S. Sinninghe D
Published in: Systematic and Applied Microbiology, Issue 44, 2021, Page(s) 126249, ISSN 0723-2020
Publisher: Elsevier BV
DOI: 10.1016/j.syapm.2021.126249

Marine Bioprospecting, Biocatalysis and Process Development (opens in new window)

Author(s): Rodrigues, Carlos J.C.; de Carvalho, Carla C.C.R.
Published in: Microorganisms, Issue Volume 10, issue 10, 2022, Page(s) 1965, ISSN 2076-2607
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/microorganisms10101965

Functional diversity of nanohaloarchaea within xylan-degrading consortia (opens in new window)

Author(s): Oleg, Reva; Enzo, Messina; Violetta, La Cono; Francesca, Crisafi; Francesco, Smedile; Gina, La Spada; Laura, Marturano; Elena A, Selivanova; Manfred, Rohde; Mart, Krupovic; Michail M, Yakimov
Published in: Frontiers in Microbiology, Issue 14, 2023, Page(s) 1182464, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2023.1182464

Nanobiocatalysts with inbuilt cofactor recycling for oxidoreductase catalysis in organic solvents (opens in new window)

Author(s): Sahlin, Jenny; Wu, Congyu; Buscemi, Andrea; Schärer, Claude; Nazemi, Seyed Amirabbas; Rejaul, S. K.; Herrera-Reinoza, Nataly; Jung, Thomas A.; Shahgaldian, Patrick
Published in: Nanoscale Advances, Issue 5, 2023, Page(s) 5036-5044, ISSN 2516-0230
Publisher: The Royal Society of Chemistry
DOI: 10.1039/D3NA00413A

Microbial communities colonising plastics during transition from the wastewater treatment plant to marine waters (opens in new window)

Author(s): Constance L. Tulloch, Rafael Bargiela, Gwion B. Williams, Tatyana N. Chernikova, Benjamin M. Cotterell, Elizabeth M. H. Wellington, Joseph Christie-Oleza, David N. Thomas, Davey L. Jones, Peter N. Golyshin
Published in: Environmental Microbiome, Issue 19, 2024, Page(s) 27, ISSN 2524-6372
Publisher: Springer Science and Business Media LLC
DOI: 10.1186/s40793-024-00569-2

Enzyme adaptation to habitat thermal legacy shapes the thermal plasticity of marine microbiomes (opens in new window)

Author(s): Marasco, Ramona; Fusi, Marco; Coscolín, Cristina; Barozzi, Alan; Almendral, David; Bargiela, Rafael; Gohlke neé Nutschel, Christina; Pfleger, Christopher; Dittrich, Jonas; Gohlke, Holger; Matesaz, Ruth; Sanchez-Carrillo, Sergio; Mapelli, Francesca; Chernikova, Tatynana N; Golyshin, Peter N; Ferrer, Manuel; Daffonchio, Daniele
Published in: Nature Communications, Issue 14, 2023, Page(s) 1045, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-023-36610-0

Special Issue on “Biocatalysis, Enzyme and Process Engineering” (opens in new window)

Author(s): Pedro Fernandes, Carla C. C. R. de Carvalho
Published in: Processes, Issue 11, 2023, Page(s) 740, ISSN 2227-9717
Publisher: MDPI AG
DOI: 10.3390/pr11030740

Behind the Scenes of PluriZyme Designs (opens in new window)

Author(s): Robles-Martín, Ana; Roda, Sergi; Muñoz-Tafalla, Rubén; Guallar, Víctor
Published in: Eng, Issue 5(1), 2024, Page(s) 91-103, ISSN 2673-4117
Publisher: MDPI
DOI: 10.3390/eng5010006

Harnessing extremophilic carboxylesterases for applications in polyester depolymerisation and plastic waste recycling (opens in new window)

Author(s): Williams, Gwion B; Ma, Hairong; Khusnutdinova, Anna N.; Yakunin, Alexander F.; Golyshin, Peter N
Published in: Essays in Biochemistry, Issue 67, 2023, Page(s) 715-729, ISSN 0071-1365
Publisher: Portland Press, Ltd.
DOI: 10.1042/EBC20220255

Cultivating marine bacteria under laboratory conditions: Overcoming the “unculturable” dogma (opens in new window)

Author(s): Carlos J. C. Rodrigues, Carla C. C. R. de Carvalho
Published in: Frontiers in Bioengineering and Biotechnology, Issue Volume 10, 2022, Page(s) 964589, ISSN 2296-4185
Publisher: Frontiers Media S.A.
DOI: 10.3389/fbioe.2022.964589

Fantastic enzymes: where and how to find them (opens in new window)

Author(s): Ferrer, Manuel; Molina-Espeja, Patricia; Daniotti, Sara; Müller, Markus
Published in: The FEBS Network, 2022
Publisher: Wiley-Blackwell Publishing Ltd
DOI: 10.5281/zenodo.7260738

Se buscan enzimas, razón: el medio ambiente (opens in new window)

Author(s): Manuel Ferrer, Cristina Coscolín Galán, Patricia Molina Espeja
Published in: The Conversation España, 2021, ISSN 2201-5639
Publisher: The Conversation
DOI: 10.5281/zenodo.5566131

Designing protein nanopores for capturing and degrading microplastics

Author(s): Ferrer, M., Robles‑Martín, A., García Linares, S., Martínez‑del‑Pozo, Á., & Guallar, V.
Published in: Springer Nature Communities, Issue 2023, 20 octubre, 2023
Publisher: Springer Nature

Polyethylene terephthalate (PET) primary degradation products affect c-di-GMP-, cAMP-signaling and quorum sensing (QS) in<i>Vibrio gazogenes</i>DSM 21264 (opens in new window)

Author(s): Lena Preuss, Malik Alawi, Albert Dumnitch, Ly Trinh, Wolfgang Maison, Nils Burmeister, Anja Poehlein, Rolf Daniel, Christel Vollstedt, Wolfgang R. Streit
Published in: bioRxiv, 2025
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2025.01.28.635239

El uso de enzimas para conseguir productos de consumo diario más sostenibles (opens in new window)

Author(s): Ferrer, Manuel; Molina, Patricia; Peñalver, Carolina
Published in: Revista Ambienta, Issue 128 (Innovation), 2021, ISSN 2605-4787
Publisher: Gobierno de España, Ministerio para la Transición Ecológica y el Reto Demográfico
DOI: 10.5281/zenodo.5384608

Intellectual Property Rights

FUMONISIN ENZYMATIC DEGRADATION

Application/Publication number: 22 383014
Date: 2022-10-21
Applicant(s): AGENCIA ESTATAL CONSEJO SUPERIOR DE INVESTIGACIONES CIENTIFICAS

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