Complex eco-evolutionary dynamics of aquatic ecosystems faced with human-induced and environmental stress

Project Information

COMPLEX-FISH

Grant agreement ID: 770884

DOI

10.3030/770884

Project closed

EC signature date 19 January 2018

Start date 1 June 2018

End date 31 August 2024

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 1 999 391,00

EU contribution

€ 1 999 391,00

Coordinated by

JYVASKYLAN YLIOPISTO
Finland

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (48)

A modified niche model for generating food webs with stage-structured consumers: The stabilizing effects of life-history stages on complex food webs

Author(s): Etsuko Nonaka; Anna Kuparinen
Published in: Ecology and Evolution, 2021, ISSN 2045-7758
Publisher: John Wiley and Sons Ltd
DOI: 10.22541/au.161211501.10254178/v1

Disentangling conditional effects of multiple regime shifts on Atlantic cod productivity

Author(s): Tommi Perälä, Esben M. Olsen, Jeffrey A. Hutchings
Published in: PLOS ONE, Issue 15/11, 2020, Page(s) e0237414, ISSN 1932-6203
Publisher: Public Library of Science
DOI: 10.1371/journal.pone.0237414

Increasing temperatures accentuate negative fitness consequences of a marine parasite

Author(s): Sean C. Godwin, Mark D. Fast, Anna Kuparinen, Kate E. Medcalf, Jeffrey A. Hutchings
Published in: Scientific Reports, Issue 10/1, 2020, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-020-74948-3

Eco‐evolutionary dynamics driven by fishing: From single species models to dynamic evolution within complex food webs

Author(s): Tommi Perälä, Anna Kuparinen
Published in: Evolutionary Applications, Issue 13/10, 2020, Page(s) 2507-2520, ISSN 1752-4571
Publisher: Wiley
DOI: 10.1111/eva.13058

Throwing down a genomic gauntlet on fisheries-induced evolution

Author(s): Jeffrey A. Hutchings, Anna Kuparinen
Published in: Proceedings of the National Academy of Sciences, Issue 118/20, 2021, Page(s) e2105319118, ISSN 0027-8424
Publisher: National Academy of Sciences
DOI: 10.1073/pnas.2105319118

Age is not just a number : Mathematical model suggests senescence affects how fish populations respond to different fishing regimes

Author(s): Ahti, Pauliina A.; Uusi‐Heikkilä, Silva; Marjomäki, Timo J.; Kuparinen, Anna
Published in: Ecology and Evolution, 2021, ISSN 2045-7758
Publisher: John Wiley and Sons Ltd
DOI: 10.1002/ece3.8058

Effects of temporal abiotic drivers on the dynamics of an allometric trophic network model

Author(s): Antti P. Eloranta; Tommi Perälä; Anna Kuparinen
Published in: Ecology and Evolution, Issue 13, 2023, Page(s) e9928, ISSN 2045-7758
Publisher: John Wiley and Sons Ltd
DOI: 10.1002/ece3.9928

Gill area explains deviations from body size–metabolic rate relationship in teleost fishes

Author(s): Anna Kuparinen; Darby Gielewski; Jeffrey A. Hutchings
Published in: Journal of Fish Biology, Issue 6, 2022, ISSN 1095-8649
Publisher: Wiley
DOI: 10.1111/jfb.15084

Salmon lice in the Pacific Ocean show evidence of evolved resistance to parasiticide treatment

Author(s): Sean C. Godwin; Andrew W. Bateman; Anna Kuparinen; Rick Johnson; John Powell; Kelly Speck; Jeffrey A. Hutchings
Published in: Scientific Reports, Issue 8, 2022, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-022-07464-1

Exploring individual and population eco-evolutionary feedbacks under the coupled effects of fishing and predation

Author(s): Dunja Jusufovski; Anna Kuparinen
Published in: Fisheries Research, Issue 6, 2019, ISSN 0165-7836
Publisher: Elsevier BV
DOI: 10.1016/j.fishres.2020.105713

Marine food web perspective to fishing‐induced evolution

Author(s): Sara Hočevar, Anna Kuparinen
Published in: Evolutionary Applications, 2021, ISSN 1752-4571
Publisher: Wiley
DOI: 10.1111/eva.13259

Multiple‐batch spawning as a bet‐hedging strategy in highly stochastic environments: an exploratory analysis of Atlantic cod

Author(s): Sara Hočevar, Jeffrey A. Hutchings, Anna Kuparinen
Published in: Evolutionary Applications, 2021, ISSN 1752-4571
Publisher: Wiley
DOI: 10.1111/eva.13251

Fish with slow life-history cope better with chronic manganese exposure than fish with fast life-history

Author(s): Silva Uusi-Heikkilä, Jouni K. Salonen, Juha S. Karjalainen, Ari Väisänen, Johanna Hippeläinen, Teemu Hämärvuo, Anna Kuparinen
Published in: Ecology and Evolution, 2024, Page(s) 2024;14:e70134., ISSN 2045-7758
Publisher: John Wiley and Sons Ltd
DOI: 10.1002/ece3.70134

Correlation between body size and longevity : New analysis and data covering six taxonomic classes of vertebrates

Author(s): Anna Kuparinen; Emily Yeung; Jeffrey A. Hutchings
Published in: Acta Oecologica, Issue 119, 2023, Page(s) 103917, ISSN 1146-609X
Publisher: Elsevier BV
DOI: 10.1016/j.actao.2023.103917

Multiple-batch spawning: a risk-spreading strategy disarmed by highly intensive size-selective fishing rate

Author(s): Sara Hočevar; Jeffrey A. Hutchings; Anna Kuparinen
Published in: Proceedings of the Royal Society of London. Biological Sciences, 2022, ISSN 1471-2954
Publisher: Royal Society Publishing
DOI: 10.1098/rspb.2022.1172

The effect of fish life-history structures on the topologies of aquatic food webs

Author(s): Milko Vesterinen; Tommi Perälä; Anna Kuparinen
Published in: Food Webs, 2021, ISSN 2352-2496
Publisher: Elsevier BV
DOI: 10.1016/j.fooweb.2021.e00213

Allee effects and the Allee-effect zone in northwest Atlantic cod

Author(s): Perälä, Tommi; Hutchings, Jeffrey A.; Kuparinen, Anna
Published in: Biology Letters, 2022, ISSN 1744-957X
Publisher: Royal Society Publishing
DOI: 10.1098/rsbl.2021.0439

Limited effects of size-selective harvesting and harvesting-induced life-history changes on the temporal variability of biomass dynamics in complex food webs

Author(s): Etsuko Nonaka, Anna Kuparinen
Published in: Ecological Modelling, 2022, ISSN 0304-3800
Publisher: Elsevier BV
DOI: 10.1016/j.ecolmodel.2022.110150

Mutually exclusive feeding yields Holling type <scp>III</scp> functional response

Author(s): Sami O. Lehtinen; Tommi A. Perälä; Silva K. Uusi‐Heikkilä; Anna K. Kuparinen
Published in: Functional Ecology, Issue 38, 2024, Page(s) 403–416, ISSN 0269-8463
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/1365-2435.14475

Atlantic cod individual spatial behaviour and stable isotope associations in a no‐take marine reserve

Author(s): Christopher T. Monk; Michael Power; Carla Freitas; Philip M. Harrison; Michelle Heupel; Anna Kuparinen; Even Moland; Colin Simpfendorfer; David Villegas‐Ríos; Esben M. Olsen
Published in: Journal of Animal Ecology, Issue 92, 2023, Page(s) 2333–2347., ISSN 0021-8790
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/1365-2656.14014

Non-trophic interactions amplify kelp harvest-induced biomass oscillations and biomass changes in a kelp forest ecological network model

Author(s): Perälä, Tommi; Pesari, Susanna N. K.; Ahti, Pauliina A.; Lehtinen, Sami O.; Schoenrock, Kathryn M.; Kuparinen, Anna
Published in: Marine Ecology Progress Series, Issue 722, 2023, Page(s) 19-36, ISSN 0171-8630
Publisher: Inter-Research Science Publishing
DOI: 10.3354/meps14438

Generalist invasion in a complex lake food web

Author(s): Kuparinen, Anna; Uusi‐Heikkilä, Silva; Perälä, Tommi; Ercoli, Fabio; Eloranta, Antti P.; Cremona, Fabien; Nõges, Peeter; Laas, Alo; Nõges, Tiina
Published in: Conservation Science and Practice, Issue 2023, 2023, Page(s) e12931, ISSN 2578-4854
Publisher: Wiley
DOI: 10.1111/csp2.12931

Fish with slow life-history cope better with chronic manganese exposure than fish with fast life-history

Author(s): Silva Uusi-Heikkilä, Jouni Salonen, Juha Karjalainen, Ari Väisänen, Johanna Hippeläinen, Teemu Hämärvuo, Anna Kuparinen
Published in: Ecology and Evolution, 2024, ISSN 2045-7758
Publisher: John Wiley and Sons Ltd
DOI: 10.22541/au.172463814.48140820/v1

Atlantic salmon survival at sea: temporal changes that lack regional synchrony

Author(s): Maria Tirronen; Jeffrey A. Hutchings; Sebastián A. Pardo; Anna Kuparinen
Published in: Canadian Journal of Fisheries and Aquatic Sciences, 2022, ISSN 0706-652X
Publisher: NRC Research Press
DOI: 10.1139/cjfas-2021-0302

Food-web complexity, consumer behavior, and diet specialism: impacts on ecosystem stability

Author(s): Tommi Perälä, Mikael Kuisma, Silva Uusi-Heikkilä, Anna Kuparinen
Published in: Theoretical Ecology, Issue 17, 2024, Page(s) 131-141, ISSN 1874-1738
Publisher: Springer Verlag
DOI: 10.1007/s12080-024-00580-w

Atlantic cod recovery from the Allee effect zone: contrasting ecological and evolutionary rescue

Author(s): Anna Kuparinen, Silva Uusi‐Heikkilä
Published in: Fish and Fisheries, Issue 21/5, 2020, Page(s) 916-926, ISSN 1467-2960
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/faf.12470

Warming temperatures and ectoparasitic sea lice impair internal organs in juvenile Atlantic salmon

Author(s): KE Medcalf, JA Hutchings, MD Fast, A Kuparinen, SC Godwin
Published in: Marine Ecology Progress Series, Issue 660, 2021, Page(s) 161-169, ISSN 0171-8630
Publisher: Inter-Research Science Publishing
DOI: 10.3354/meps13610

Parasite‐mediated changes in host traits alter food web dynamics

Author(s): Ines Klemme, Tommi Perälä, Sami O. Lehtinen, Anna Kuparinen
Published in: Oikos, Issue 2024, 2024, ISSN 0030-1299
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/oik.10374

Fishing triggers trophic cascade in terms of variation, not abundance, in an allometric trophic network model

Author(s): Silva Uusi-Heikkilä; Tommi Perälä; Anna Kuparinen
Published in: Canadian Journal of Fisheries and Aquatic Sciences, Issue 3, 2021, ISSN 0706-652X
Publisher: NRC Research Press
DOI: 10.1139/cjfas-2021-0146

Parameter estimation for allometric trophic network models: A variational Bayesian inverse problem approach

Author(s): Maria Tirronen, Anna Kuparinen
Published in: Methods in Ecology and Evolution, 2024, ISSN 2041-210X
Publisher: John Wiley and Sons Inc.
DOI: 10.1111/2041-210x.14447

Are there plenty of fish in the sea? How life history traits affect the eco-evolutionary consequences of population oscillations

Author(s): Pauliina A. Ahti; Silva Uusi-Heikkilä; Anna Kuparinen
Published in: Fisheries Research, 2022, ISSN 0165-7836
Publisher: Elsevier BV
DOI: 10.1016/j.fishres.2022.106409

A modified niche model for generating food webs with stage‐structured consumers: The stabilizing effects of life‐history stages on complex food webs

Author(s): Etsuko Nonaka, Anna Kuparinen
Published in: Ecology and Evolution, Issue 11/9, 2021, Page(s) 4101-4125, ISSN 2045-7758
Publisher: John Wiley and Sons Ltd
DOI: 10.1002/ece3.7309

Implications of fisheries‐induced evolution for population recovery: Refocusing the science and refining its communication

Author(s): Jeffrey A. Hutchings, Anna Kuparinen
Published in: Fish and Fisheries, 2019, ISSN 1467-2960
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/faf.12424

The role of fish life histories in allometrically scaled food‐web dynamics

Author(s): Stephanie Bland, Fernanda S. Valdovinos, Jeffrey A. Hutchings, Anna Kuparinen
Published in: Ecology and Evolution, Issue 9/6, 2019, Page(s) 3651-3660, ISSN 2045-7758
Publisher: John Wiley and Sons Ltd
DOI: 10.1002/ece3.4996

When phenotypes fail to illuminate underlying genetic processes in fish and fisheries science

Author(s): Anna Kuparinen, Jeffrey A Hutchings
Published in: ICES Journal of Marine Science, Issue 76/4, 2019, Page(s) 999-1006, ISSN 1054-3139
Publisher: Oxford University Press
DOI: 10.1093/icesjms/fsz002

Potential for managing life history diversity in a commercially exploited intermediate predator, the goldsinny wrasse (Ctenolabrus rupestris)

Author(s): Esben Moland Olsen, Kim Tallaksen Halvorsen, Torkel Larsen, Anna Kuparinen
Published in: ICES Journal of Marine Science, Issue 76/2, 2018, Page(s) 410-417, ISSN 1054-3139
Publisher: Oxford University Press
DOI: 10.1093/icesjms/fsy183

Size does matter — the eco-evolutionary effects of changing body size in fish

Author(s): Pauliina A. Ahti, Anna Kuparinen, Silva Uusi-Heikkilä
Published in: Environmental Reviews, Issue 28/3, 2020, Page(s) 311-324, ISSN 1181-8700
Publisher: NRC Research Press
DOI: 10.1139/er-2019-0076

Calibrating Expert Assessments Using Hierarchical Gaussian Process Models

Author(s): Tommi Perälä, Jarno Vanhatalo, Anna Chrysafi
Published in: Bayesian Analysis, Issue 15/4, 2020, Page(s) 1251-1280, ISSN 1936-0975
Publisher: Carnegie Mellon University
DOI: 10.1214/19-ba1180

Consequences of Single-Locus and Tightly Linked Genomic Architectures for Evolutionary Responses to Environmental Change

Author(s): Rebekah A Oomen, Anna Kuparinen, Jeffrey A Hutchings
Published in: Journal of Heredity, 2020, ISSN 0022-1503
Publisher: Oxford University Press
DOI: 10.1093/jhered/esaa020

Return of the apex predator — how brown trout (Salmo trutta) re-establishment shapes an ecosystem

Author(s): Tommi Perälä, Silva Uusi-Heikkilä, Anna Kuparinen
Published in: Annales Zoology Fennici, 2021, ISSN 1797-2450
Publisher: Finnish Zoological and Botanical Publishing Board
DOI: 10.5735/086.058.0409

Effects of top predator re-establishment and fishing on a simulated food web: Allometric Trophic Network model for Lake Oulujärvi

Author(s): Eevi Kokkonen, Mikael Kuisma, Pekka Hyvärinen, Anssi Vainikka, Kristiina Vuorio, Tommi Perälä, Laura S. Härkönen, Satu Estlander, Anna Kuparinen
Published in: Ecological Modelling, Issue 492, 2024, Page(s) 110715, ISSN 0304-3800
Publisher: Elsevier BV
DOI: 10.1016/j.ecolmodel.2024.110715

Temporary Allee effects among non-stationary recruitment dynamics in depleted gadid and flatfish populations

Author(s): Maria Tirronen; Tommi Perälä; Anna Kuparinen
Published in: Fish and Fisheries, Issue 8, 2022, ISSN 1467-2979
Publisher: Wiley
DOI: 10.1111/faf.12623

Cyclical and stochastic thermal variability affects survival and growth in brook trout.

Author(s): Olivia M. Pisano; Anna Kuparinen; Jeffrey A. Hutchings
Published in: Journal of Thermal Biology, Issue 6, 2019, ISSN 0306-4565
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.jtherbio.2019.07.012

Building up an ecologically sustainable and socially desirable post-COVID-19 future

Author(s): Rémi Duflot, Stefan Baumeister, Daniel Burgas, Kyle Eyvindson, María Triviño, Clemens Blattert, Anna Kuparinen, Mária Potterf
Published in: Sustainability Science, 2021, ISSN 1862-4065
Publisher: Springer Verlag
DOI: 10.1007/s11625-021-00940-z

Comparison of Bayesian and numerical optimization-based diet estimation on herbivorous zooplankton

Author(s): Jaakko J. Litmanen, Tommi A. Perälä, Sami J. Taipale
Published in: Philosophical Transactions of the Royal Society B: Biological Sciences, Issue 375/1804, 2020, Page(s) 20190651, ISSN 0962-8436
Publisher: Royal Society of London
DOI: 10.1098/rstb.2019.0651

Environmental forcing alters fisheries selection

Author(s): Davide Thambithurai; Anna Kuparinen
Published in: Trends in Ecology and Evolution, Issue 39, 2024, Page(s) 131-140, ISSN 0169-5347
Publisher: Elsevier BV
DOI: 10.1016/j.tree.2023.08.015

Growth and longevity of the endangered freshwater pearl mussel (<scp><i>Margaritifera margaritifera</i></scp>): Implications for conservation and management

Author(s): Sabrina Nykänen, Jouni Taskinen, Mahsa Hajisafarali, Anna Kuparinen
Published in: Aquatic Conservation: Marine and Freshwater Ecosystems, Issue 34, 2024, ISSN 1052-7613
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/aqc.4205

Can regime shifts in reproduction be explained by changing climate and food availability?

Author(s): Tirronen, Maria; Depestele, Jochen; Kuparinen, Anna
Published in: Frontiers in Marine Science, Issue 10, 2023, Page(s) 1167354, ISSN 2296-7745
Publisher: Frontiers
DOI: 10.3389/fmars.2023.1167354

Book chapters (1)

Planetary well-being

Author(s): Kortetmäki, Teea; Puurtinen, Mikael; Salo, Miikka; Aro, Riikka; Baumeister, Stefan; Duflot, Rémi; Elo, Merja; Halme, Panu; Husu, Hanna-Mari; Huttunen, Suvi; Hyvönen, Katriina; Karkulehto, Sanna; Kataja-aho, Saana; Keskinen, Kirsi E.; Kulmunki, Inari; Mäkinen, Tuuli; Näyhä, Annukka; Okkolin, Mari-Anne; Perälä, Tommi; Purhonen, Jenna; Raatikainen, Kaisa J.; Raippalinna, Liia-Maria; Salonen,
Published in: Interdisciplinary Perspectives on Planetary Well-Being, 2024, ISBN 978-1-032-36828-3
Publisher: Routledge
DOI: 10.4324/9781003334002-3

Conference proceedings (2)

Workshop on ICES reference points (WKREF2)

Author(s): Lordan, Colm; Orio, Alessandro; Kempf, Alexander; Pierucci, Andrea; Kuparinen, Anna; Rindorf, Anna; Peyronnet, Arnaud; Wilson, Ashley; Albertsen, Christoffer Moesgaard; Konrad, Christoph; Sparrevohn, Claus Reedtz; Minto, Cóilín; Howell, Daniel; Gilljam, David; Miller, David; Garcia, Dorleta; Armelloni, Enrico; Abad, Esther; Masnadi, Francesco; Scarcella, Giuseppe; Dingsør, Gjert Endre; Winker,
Published in: ICES Scientific Reports, 2022
Publisher: ICES
DOI: 10.17895/ices.pub.20557008

Benchmark Workshop on Atlantic Salmon (Salmo salar) in the North Atlantic (WKBSALMON)

Author(s): Perälä, Tommi; White, Jonathan; Adams, Grant; April, Julien; Bárðarson, Hlynur; Ahlbeck Bergendahl, Ida; Bolstad, Geir; Breau, Cindy; Bull, Colin; Chaput, Gerald; Cooper, Anne; Dauphin, Guillaume; Erkinaro, Jaakko; Gillson, Jonathan; Gregory, Stephen; Jepsen, Niels; Kermoade, MacKenzie; Lebot, Clément; Legault, Chris; Maxwell, Hugo; McGinnity, Philip; Meerburg, David; Millane, Michael; Nadoln
Published in: ICES Scientific Reports, Issue 1, 2023, ISSN 2618-1371
Publisher: NA
DOI: 10.17895/ices.pub.24752079