Research empowerment on solute carriers (ReSOLUTE)

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Assays for SLCs based on fluorescent ligands, fluorescence-labelling of SLCs or fluorogenic probes

A report summarizing results from fluorescence-based assays.

Constructs and protocols for priority SLCs

Set of expression vectors and protein purification protocols for SLCs on the priority list.

Transcriptome and metabolome for priority SLCs

Quantitative differential transcriptome, metabolome data within a cell line that naturally expresses each SLC in the priority list in both basal and stimuli challenged states.

Data Management Plan 2

Initial version of DMP after 6 months, an updated version latest mid-term and a final version

Vector generation

Collection of lentiviral and Flp-In compatible vectors carrying CRISPR-based Cas9 and sgRNAs targeting all SLCs, together with vectors carrying tagged and untagged cDNAs for >80% of the SLC family

ReSOLUTE knowledgebase

Concept for database of integrated publicly available knowledge and ReSOLUTE web portal.

Data Mining

Data mining support for priority ranking of SLC family members for target selection in WP4.

Informatic anylysis of metabolomic data

Development and deployment of workflows for QSAR analysis of the ability of particular overexpressed SLCs to take up different substrates, and judicious variation of those substrates.

SLC overexpression in HEK293

Collection of >300 HEK293 isogenic cell lines, each overexpressing a SLC gene, quality-controlled and characterized with a multi-parameter approach

DEP implemented (stepwise, up to M60)
Subcellular localization of target SLCs

Based on optical imaging experiments with tagged SLCs.

SLC overexpressing cell lines

Collection of 600 cell lines each overexpressing a specific SLC in untagged and tagged versions qualitycontrolled and characterized with a multiparameter approach

SLC interactome

Physical measurement (by proteomics) of coexpression/copurification of SLCs with partners.

Signature metabolic profiles using targeted metabolomics

Robust identification and quantification using LCGCMS for some 180 central metabolites

SLC Interactome for priority SLCs

Condition dependent protein interaction network data in response to on-target and orthogonal pathway stimuli modulating SLC function.

Profile of plasma metabolite changes for each SLC cell line

Use of methods of Task 2.2 to assess the largest changes between cells lines upregulated/knocked out for particular SLCs

Assays for SLCs based on SSM-electrophysiology

A report summarizing results and protocols obtained with the SURFE2R approach.

Production of validated SLC antibodies

Large set of validated antibodies targeting SLCs, together with tissue localization data.

Assays for SLCs based on fluorescent sensor proteins

A report summarizing results and protocols on measuring SLC-dependent metabolic states through fluorescent sensor proteins.

Production of antigens and high-affinity binders

Antigens for animal immunization for priority SLCs, together with DARPins or monobodies for priority SLCS and a panel of relevant SLCs.

SLC k.o. cell lines

Collection of 600 cell lines each carrying frameshift mutations in one SLC gene qualitycontrolled and characterized with a multiparameter approach

Assays for SLCs based on cell lines that couple growth to SLC function

A report summarizing results and protocols on assay based on genetic engineering of cell lines dependent on specific SLCs for survival.

Assays for SLCs based on mass spectrometry, thermal shift, radiolabelled or fluorescent compounds

A report summarizing results from classical transport assays.

Assays for (electrogenic) transporters

A report summarizing results and protocols obtained using fluorescent sensitive dyes and impedance measurements.

Physiological and physical network map for priority SLCs

Condition-dependent regulatory models integrating transcriptomics, metabolomics and proteomics data for priority SLCs.

Data Management Plan 3

Initial version of DMP after 6 months, an updated version latest mid-term and a final version

Methodology for general detection of plasma metabolites and drug/dietary components

LC/GC-MS coupled to novel deconvolution routines for determining the approximately 3,000 molecules typically observable in serum

Protein expression screen

A family-wide assessment of protein expression yields in recombinant expression systems.

Determination of SLCs using ions as (co-)substrates

The recognition that many substrates are symporters or antiporters means that one can detect this by assessing the movement of co-ions when transport substrates are added to suitable cell lines.

SLC genetic interaction map

Production of ‘synthetic phenotypes’, based on the principle that knocking out both variants of a transporter with redundant function (e.g. loss of ability to transport X) thereby causes a phenotype from which one can infer function.

SLC k.o. in HEK293

Collection of 300 HEK293 isogenic cell lines each carrying frameshift mutations in a SLC gene qualitycontrolled and characterized with a multiparameter approach

Reconstitution of SLCs in proteoliposomes and nanodiscs

Nanodisc- and liposome-reconstituted SLCs for in vitro assays of successfully purified SLCs of the priority list.

Data Management Plan 1

Initial version of DMP after 6 months, an updated version latest mid-term and a final version.

Protein production for the SLCs in the priority list

Production of milligram quantities of highly pure (>90%) and stable protein samples for >30% of the priority SLCs.

ReSOLUTE web portal

Data sharing and approval process, and prototype of interface for data access at public web portal up and running

ReSOLUTE database

Infrastructure and data warehouse for sharing annotated raw data files and analysis results; prototype ready after first year and annual releases of new versions.

Publications

Immunofluorescence for protein binder validation

Author(s): Gelová, Zuzana; Ingles-Prieto, Alvaro
Published in: 2022
Publisher: n/a
DOI: 10.5281/zenodo.7462234

Data Management Plan 2

Author(s): Ulrich Goldmann, Gerhard Ecker, Vitaly Sedlyarov, Lia Scarabottolo, Vania Manolova, Claire Colas
Published in: 2020
Publisher: Zenodo
DOI: 10.5281/zenodo.5179816

Assays for (electrogenic) transporters

Author(s): Lia Scarabottolo; Juergen Reinhardt; Huub Sijben
Published in: 2020
Publisher: Zenodo
DOI: 10.5281/zenodo.5179859

ReSOLUTE knowledgebase

Author(s): Ulrich Goldmann; Vitaly Sedlyarov; Daniela Digles; Barbara Füzi
Published in: 2018
Publisher: Zenodo
DOI: 10.5281/zenodo.5179834

RESOLUTE: Data Management Plan

Author(s): Goldmann, Ulrich; Ecker, Gerhard; Sedlyarov, Vitaly; Scarabottolo, Lia; Manolova, Vania; Colas, Claire
Published in: Issue 1, 2019
Publisher: n/a
DOI: 10.5281/zenodo.4309586

SLC k.o. cell lines

Author(s): Gernot Wolf; Klaus Seuwen; Barbara Barbosa; Eirini Christodoulaki; Alvaro Ingles-Prieto; Ulrich Goldmann; Christoph Klimek; Svenja Onstein; Vitaly Sedlyarov; Tabea Wiedmer; Diana Santacruz; Coralie Viollet; Florence Massey; Veeranagouda Yaligara
Published in: 2021
Publisher: Zenodo
DOI: 10.5281/zenodo.10419148

RNA-Seq Transcriptomic Profiling

Author(s): Viollet, Coralie; Santacruz, Diana; Knebel, Dagmar; Rust, Werner; Acker, Susanne; Dick, Alec
Published in: 2022
Publisher: n/a
DOI: 10.5281/zenodo.7462292

General protocol for SLC protein purification

Author(s): David B. Sauer; Huanyu Li; Sagar Raturi; Andreea Scacioc; Tina Bohstedt; Abilasha Balakrishnan
Published in: 2022
Publisher: n/a
DOI: 10.5281/zenodo.7462714

Western Blotting of WT-OE cell lines

Author(s): Svenja Onstein; Eva Liñeiro; Christoph Klimek; Barbara Barbosa; Gernot Wolf
Published in: 2022
Publisher: Zenodo
DOI: 10.5281/zenodo.7457377

Antibody Characterization Report for Reduced folate transporter SLC19A1 (FOLT)

Author(s): Ayoubi, Riham; McPherson, Peter S.; Laflamme, Carl
Published in: 2021
Publisher: Zenodo
DOI: 10.5281/zenodo.4733107

Ligation Independent Cloning of transporter gene into BacMam vector

Author(s): Sauer, David B.; Huanyu Li; Raturi, Sagar; Scacioc, Andreea; Bohstedt, Tina; Abilasha Balakrishnan
Published in: 2022
Publisher: Zenodo
DOI: 10.5281/zenodo.7462743

Data mining

Author(s): Daniela Digles; Jiani Li; Ulrich Goldmann
Published in: 2018
Publisher: Zenodo
DOI: 10.5281/zenodo.5179841

High-throughput immunofluorescence to validate high-affinity binders

Author(s): Alvaro Ingles-Prieto; Felix Kartnig
Published in: 2022
Publisher: n/a
DOI: 10.5281/zenodo.7457392

Mitochondrial enrichment followed by Affinity Purification couple to Mass Spectrometry (AP-MS)

Author(s): Eva Liñeiro; Alvaro Ingles-Prieto; Fabian Frommelt; André C. Mueller
Published in: 2022
Publisher: n/a
DOI: 10.5281/zenodo.7462207

SLC overexpression in HEK293

Author(s): Wolf, Gernot; Seuwen, Klaus
Published in: 2021
Publisher: n/a
DOI: 10.5281/zenodo.5566804

Large Scale Transduction of Expi293F Cells with BacMam Virus

Author(s): Sauer, David B.; Huanyu Li; Raturi, Sagar; Scacioc, Andreea; Bohstedt, Tina; Abilasha Balakrishnan
Published in: 2022
Publisher: n/a
DOI: 10.5281/zenodo.7462911

Expression analysis and co-localization imaging of Jump In T-REx HEK293 WT-OE cell pools

Author(s): Pfeifer, Martin; Kohlbrenner, Mariah; Chang, Lena; Lambrigger, Pascal; Ingles-Prieto, Alvaro; Reinhardt, Jürgen
Published in: 2022
Publisher: n/a
DOI: 10.5281/zenodo.7457345

Generation of Jump-In T-REx HEK293 wild type-overexpression cell lines

Author(s): Klimek, Christoph; Onstein, Svenja; Barbosa, Barbara; Ingles-Prieto, Alvaro; Skucha, Anna; Ibig, Yvonne; Seuwen, Klaus; Wolf, Gernot
Published in: 2022
Publisher: Zenodo
DOI: 10.5281/zenodo.7457220

Construction of a Bacmid (BacMam) vector containing the SLC gene

Author(s): David B. Sauer; Huanyu Li; Sagar Raturi; Andreea Scacioc; Tina Bohstedt; Abilasha Balakrishnan
Published in: 2022
Publisher: n/a
DOI: 10.5281/zenodo.7462780

Antibody Characterization Report for Equilibrative nucleoside transporter 1 SLC29A1 (ENT1)

Author(s): Alshafie, Walaa; Ayoubi, Riham; McPherson, Peter S.; Laflamme, Carl
Published in: 2021
Publisher: Zenodo
DOI: 10.5281/zenodo.4733134

Transfection to Generate BacMam Virus containing SLC transporter and small scale expression testing

Author(s): David B. Sauer; Huanyu Li; Sagar Raturi; Andreea Scacioc; Tina Bohstedt; Abilasha Balakrishnan
Published in: 2022
Publisher: n/a
DOI: 10.5281/zenodo.7462876

Vector generation

Author(s): Gernot Wolf; Alvaro Ingles-Prieto; Enrico Girardi; Vitaly Sedlyarov; Svenja Onstein; Christoph Klimek; Barbara Barbosa
Published in: 2019
Publisher: Zenodo
DOI: 10.5281/zenodo.5179824

Assays for SLCs based on fluorescent sensor proteins

Author(s): Philipp Leippe; Lia Scarabottolo
Published in: 2020
Publisher: Zenodo
DOI: 10.5281/zenodo.5179857

Antibody Characterization Report for Very long-chain acyl-CoA synthetase SLC27A2 (VLCS)

Author(s): Ayoubi, Riham; McPherson, Peter S.; Laflamme, Carl
Published in: 2021
Publisher: Zenodo
DOI: 10.5281/zenodo.4733132

RNA extraction and purification

Author(s): Klimek, Christoph; Onstein, Svenja; Barbosa, Barbara; Wolf, Gernot
Published in: 2022
Publisher: n/a
DOI: 10.5281/zenodo.7462188

SLC overexpressing cell lines

Author(s): Gernot Wolf; Klaus Seuwen; Barbara Barbosa; Eirini Christodoulaki; Alvaro Ingles-Prieto; Ulrich Goldmann; Christoph Klimek; Svenja Onstein; Vitaly Sedlyarov; Tabea Wiedmer; Diana Santacruz; Coralie Viollet
Published in: 2021
Publisher: Zenodo
DOI: 10.5281/zenodo.10419229

Targeted Metabolomics Sample Preparation

Author(s): Tabea Wiedmer; Abigail Jarret; Sabrina Lindinger
Published in: 2022
Publisher: n/a
DOI: 10.5281/zenodo.7462174

Antibody Characterization Report for Solute carrier family 2, facilitated glucose transporter member 6 SLC2A6 (GLUT-6)

Author(s): Ayoubi, Riham; McPherson, Peter S.; Laflamme, Carl
Published in: 2021
Publisher: Zenodo
DOI: 10.5281/zenodo.4733123

Generation of Single Cell Knockout Clones

Author(s): Svenja Onstein; Christoph Klimek; Barbara Barbosa; Anna Skucha; Gernot Wolf
Published in: 2022
Publisher: Zenodo
DOI: 10.5281/zenodo.7457297

Affinity Purification couple to Mass Spectrometry (AP-MS)

Author(s): Alvaro Ingles-Prieto; Eva Liñeiro; Ariel Bensimon; Fabian Frommelt; André C. Mueller
Published in: 2022
Publisher: n/a
DOI: 10.5281/zenodo.7457416

Proteomics characterization of RESOLUTE parental cell lines

Author(s): Eva Liñeiro; André C. Mueller
Published in: 2022
Publisher: Zenodo
DOI: 10.5281/zenodo.7462271

Methodology for general detection of plasma metabolites and drug/dietary components

Author(s): Claire Steppan; Marina Wright Muelas; Douglas Kell; Tabea Wiedmer; Mary Piotrowski
Published in: 2019
Publisher: Zenodo
DOI: 10.5281/zenodo.5179870

Purification of SPNS2 from Expi293FTM Cells

Author(s): David B. Sauer; Huanyu Li; Sagar Raturi; Andreea Scacioc; Tina Bohstedt; Abilasha Balakrishnan
Published in: 2022
Publisher: Zenodo
DOI: 10.5281/zenodo.7468558

ReSOLUTE web portal

Author(s): Ulrich Goldmann; Vitaly Sedlyarov
Published in: 2019
Publisher: Zenodo
DOI: 10.5281/zenodo.5179880

Antibody Characterization Report for Excitatory amino acid transporter 1 SLC1A3 (EAAT1)

Author(s): Ayoubi, Riham; McPherson, Peter S.; Laflamme, Carl
Published in: 2021
Publisher: Zenodo
DOI: 10.5281/zenodo.4733103

Spatial proteomics couple to Mass Spectrometry (BioID-MS)

Author(s): Ingles-Prieto, Alvaro; Liñeiro, Eva; Frommelt, Fabian
Published in: 2022
Publisher: Zenodo
DOI: 10.5281/zenodo.7457436

ReSOLUTE database

Author(s): Ulrich Goldmann; Vitaly Sedlyarov
Published in: 2019
Publisher: Zenodo
DOI: 10.5281/zenodo.5179889

Signature metabolic profiles using targeted metabolomics

Author(s): Tabea Wiedmer, Eirini Christodoulaki, Sabrina Lindinger, Iciar Serrano, Christoph Bueschl, Thomas Hannich
Published in: 2022
Publisher: Zenodo
DOI: 10.5281/zenodo.10419241

SLC k.o. in HEK293

Mass Spectrometry analysis (data acquisition)

Author(s): Mueller, André C.; Liñeiro, Eva
Published in: 2022
Publisher: n/a
DOI: 10.5281/zenodo.7462252

SLC4A4 antibody characterization report

Author(s): Garcia, Julio; Gelova, Zuzana
Published in: 2023
Publisher: n/a
DOI: 10.5281/zenodo.10033541

Protein production of SLC63A2

Author(s): Vera Pütter; Yung-Ning Chang
Published in: 2022
Publisher: Zenodo
DOI: 10.5281/zenodo.7468532

Generation of Knockout-Overexpression Cell Lines

Author(s): Christoph Klimek; Svenja Onstein; Barbara Barbosa; Alvaro Ingles-Prieto; Anna Skucha; Gernot Wolf
Published in: 2022
Publisher: n/a
DOI: 10.5281/zenodo.7457295

Antibody Characterization Report for Glucose-6-phosphate exchanger SLC37A4 (G6PT)

Author(s): Ayoubi, Riham; McPherson, Peter S.; Laflamme, Carl
Published in: 2021
Publisher: Zenodo
DOI: 10.5281/zenodo.4733121

Automation of high-throughput mRNA-seq library preparation: a robust, hands-free and time efficient methodology

Author(s): Diana Santacruz, Francis O Enane, Katrin Fundel-Clemens, Martin Giner, Gernot Wolf, Svenja Onstein, Christoph Klimek, Zachary Smith, Bhagya Wijayawardena, Coralie Viollet
Published in: SLAS Discovery, 2022, ISSN 2472-5552
Publisher: Elsevier
DOI: 10.1016/j.slasd.2022.01.002

The macrocycle inhibitor landscape of SLC-transporter

Author(s): Granulo N, Sosnin S, Digles D, Ecker G.
Published in: Molecular Informatics, 2024, ISSN 1868-1743
Publisher: Wiley - VCH Verlag GmbH & CO. KGaA
DOI: 10.1002/minf.202300287

MPP+-Induced Changes in Cellular Impedance as a Measure for Organic Cation Transporter (SLC22A1-3) Activity and Inhibition

Author(s): Mocking TAM, Sijben HJ, Vermeulen YW, IJzerman AP, Heitman LH
Published in: International Journal of Molecular Sciences, 2022, ISSN 1422-0067
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms23031203

Development of a live cell assay for the zinc transporter ZnT8.

Author(s): Azzollini L, Prete DD, Wolf G, Klimek C, Saggioro M, Ricci F, Christodoulaki E, Wiedmer T, Ingles-Prieto A, Superti-Furga G, Scarabottolo L.
Published in: SLAS Discovery, 2024, ISSN 2472-5560
Publisher: Elsevier Inc.
DOI: 10.1016/j.slasd.2024.100166

Experimental and Computational Analysis of Newly Identified Pathogenic Mutations in the Creatine Transporter SLC6A8

Author(s): Evandro Ferrada, Tabea Wiedmer, Wen-An Wang, Fabian Frommelt, Barbara Steurer, Christoph Klimek, Sabrina Lindinger, Tanja Osthushenrich, Andrea Garofoli, Silvia Brocchetti, Samuel Bradberry, Jiahui Huang, Aidan MacNamara, Lia Scarabottolo, Gerhard F. Ecker, Anders Malarstig, Giulio Superti-Furga
Published in: Journal of Molecular Biology, 2024, ISSN 0022-2836
Publisher: Academic Press
DOI: 10.1016/j.jmb.2023.168383

Functional characterization of SLC39 family members ZIP5 and ZIP10 in overexpressing HEK293 cells reveals selective copper transport activity

Author(s): Polesel M, Ingles-Prieto A, Christodoulaki E, Ferrada E, Doucerain C, Altermatt P, Knecht M, Kuhn M, Steck AL, Wilhelm M, Manolova V.
Published in: Biometals, 2023, ISSN 0966-0844
Publisher: Kluwer Academic Publishers
DOI: 10.1007/s10534-022-00474-6

High-throughput expression and purification of human solute carriers for structural and biochemical studies

Author(s): Raturi S, Li H, Chang YN, Scacioc A, Bohstedt T, Fernandez-Cid A, Evans A, Abrusci P, Balakrishnan A, Pascoa TC, He D, Chi G, Kaur Singh N, Ye M, Li A, Shrestha L, Wang D, Williams EP, Burgess-Brown NA, Dürr KL, Puetter V, Ingles-Prieto A, Sauer DB.
Published in: Journal of Visualized Experiments, 2023, ISSN 1940-087X
Publisher: MYJoVE Corporation
DOI: 10.3791/65878

An Overview of Cell-Based Assay Platforms for the Solute Carrier Family of Transporters

Author(s): Vojtech Dvorak, Tabea Wiedmer, Alvaro Ingles-Prieto, Patrick Altermatt, Helena Batoulis, Felix Bärenz, Eckhard Bender, Daniela Digles, Franz Dürrenberger, Laura H. Heitman, Adriaan P. IJzerman, Douglas B. Kell, Stefanie Kickinger, Daniel Körzö, Philipp Leippe, Thomas Licher, Vania Manolova, Riccardo Rizzetto, Francesca Sassone, Lia Scarabottolo, Avner Schlessinger, Vanessa Schneider, Hubert J.
Published in: Frontiers in Pharmacology, Issue 12, 2021, ISSN 1663-9812
Publisher: Frontiers Media S.A.
DOI: 10.3389/fphar.2021.722889

Structural and functional annotation of solute carrier transporters: implication for drug discovery

Author(s): Vojtech Dvorak & Giulio Superti-Furga
Published in: Expert Opinion on Drug Discovery, 2023, ISSN 1746-0441
Publisher: Informa Healthcare
DOI: 10.1080/17460441.2023.2244760

A substrate‐based ontology for human solute carriers

Author(s): Eva Meixner, Ulrich Goldmann, Vitaly Sedlyarov, Stefania Scorzoni, Manuele Rebsamen, Enrico Girardi, Giulio Superti‐Furga
Published in: Molecular Systems Biology, Issue 16/7, 2020, ISSN 1744-4292
Publisher: Nature Publishing Group
DOI: 10.15252/msb.20209652

Label-free high-throughput screening assay for the identification of norepinephrine transporter (NET/SLC6A2) inhibitors

Author(s): Hubert J. Sijben, Wieke M. van Oostveen, Peter B. R. Hartog, Laura Stucchi, Andrea Rossignoli, Giovanna Maresca, Lia Scarabottolo, Adriaan P. IJzerman, Laura H. Heitman
Published in: Scientific Reports, Issue 11/1, 2021, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-021-91700-7

Targeting solute carriers to modulate receptor–ligand interactions

Author(s): Hubert J. Sijben, Giulio Superti-Furga, Adriaan P. IJzerman, Laura H. Heitman
Published in: Trends in Pharmacological Sciences, 2022, ISSN 0165-6147
Publisher: Elsevier BV
DOI: 10.1016/j.tips.2022.02.004

Accelerating SLC Transporter Research: Streamlining Knowledge and Validated Tools

Author(s): Tabea Wiedmer, Alvaro Ingles-Prieto, Ulrich Goldmann, Claire M. Steppan, Giulio Superti-Furga, the RESOLUTE, REsolution consortia
Published in: Clinical Pharmacology & Therapeutics, Issue 00099236, 2022, ISSN 0009-9236
Publisher: Nature Publishing Group
DOI: 10.1002/cpt.2639

Image-based quantification of mitochondrial iron uptake via Mitoferrin-2

Author(s): Polesel M, Wildschut MHE, Doucerain C, Kuhn M, Flace A, Steck AL, Wilhelm M, Ingles-Prieto A, Wiedmer T, Superti-Furga G, Manolova V, Dürrenberger F.
Published in: Mitochondrion, 2024, ISSN 1567-7249
Publisher: Elsevier BV
DOI: 10.1016/j.mito.2024.101889

Solid-supported membrane (SSM)-based electrophysiology assays using surface electrogenic event reader technology (SURFE²R) in early drug discovery

Author(s): Pommereau, A., Licher, T., & Bärenz, F.
Published in: Current Protocols, 2023, ISSN 2691-1299
Publisher: Wiley
DOI: 10.1002/cpz1.650

Label-free detection of prostaglandin transporter (SLCO2A1) function and inhibition: insights by wound healing and TRACT assays

Author(s): Mocking TAM, van Oostveen W, Van Veldhoven JP, Minnee H, Fehres C, Whitehurst C, IJzerman AP, Heitman LH.
Published in: Front. Pharmacol., 2024, ISSN 1663-9812
Publisher: Frontiers Media S.A.
DOI: 10.3389/fphar.2024.1372109

Proteochemometric Modeling Identifies Chemically Diverse Norepinephrine Transporter Inhibitors

Author(s): Brandon J. Bongers, Huub J. Sijben, Peter B. R. Hartog, Andrey Tarnovskiy, Adriaan P. IJzerman, Laura H. Heitman, and Gerard J. P. van Westen
Published in: Journal of Chemical Information and Modeling, 2023, ISSN 1549-9596
Publisher: American Chemical Society
DOI: 10.1021/acs.jcim.2c01645

Studies of structural determinants of substrate binding in the Creatine Transporter (CreaT, SLC6A8) using molecular models

Author(s): Claire Colas, Giulia Banci, Riccardo Martini, Gerhard F. Ecker
Published in: Scientific Reports, Issue 10/1, 2020, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-020-63189-z

Toward a Systematic Structural and Functional Annotation of Solute Carriers Transporters-Example of the SLC6 and SLC7 Families.

Author(s): Claire Colas
Published in: Frontiers in Pharmacology, 2020, ISSN 1663-9812
Publisher: Frontiers Media S.A.
DOI: 10.3389/fphar.2020.01229

Impedance-Based Phenotypic Readout of Transporter Function: A Case for Glutamate Transporters

Author(s): Sijben HJ, Dall’ Acqua L, Liu R, Jarret A, Christodoulaki E, Onstein S, Wolf G, Verburgt SJ, Le Dévédec SE, Wiedmer T, Superti-Furga G, IJzerman AP and Heitman LH
Published in: Frontiers in Pharmacology, 2022, ISSN 1663-9812
Publisher: Frontiers Media S.A.
DOI: 10.3389/fphar.2022.872335

A study of the dopamine transporter using the TRACT assay, a novel in vitro tool for solute carrier drug discovery

Author(s): Hubert J. Sijben, Julie J. E. van den Berg, Jeremy D. Broekhuis, Adriaan P. IJzerman, Laura H. Heitman
Published in: Scientific Reports, Issue 11/1, 2021, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-020-79218-w

Gain-of-function genetic screens in human cells identify SLC transporters overcoming environmental nutrient restrictions

Author(s): Manuele Rebsamen, Enrico Girardi, Vitaly Sedlyarov, Stefania Scorzoni, Konstantinos Papakostas, Manuela Vollert, Justyna Konecka, Bettina Guertl, Kristaps Klavins, Tabea Wiedmer, Giulio Superti-Furga
Published in: Life Science Alliance, Issue 25751077, 2022, ISSN 2575-1077
Publisher: Life Science Alliance, LLC
DOI: 10.26508/lsa.202201404

Still in Search for an EAAT Activator: GT949 Does Not Activate EAAT2, nor EAAT3 in Impedance and Radioligand Uptake Assays

Author(s): Lieve van Veggel, Tamara A.M. Mocking, Hubert J. Sijben, Rongfang Liu, Marina Gorostiola González, Majlen A. Dilweg, Jeroen Royakkers, Anna Li, Vijay Kumar, Yin Yao Dong, Alex Bullock, David B. Sauer, Hanne Diliën, Gerard J.P. van Westen, Rudy Schreiber, Laura H. Heitman, and Tim Vanmierlo
Published in: ACS Chemical Neuroscience, 2024, ISSN 1948-7193
Publisher: American Chemical Society
DOI: 10.1021/acschemneuro.3c00731

The RESOLUTE consortium: unlocking SLC transporters for drug discovery

Author(s): Giulio Superti-Furga, Daniel Lackner, Tabea Wiedmer, Alvaro Ingles-Prieto, Barbara Barbosa, Enrico Girardi, Ulrich Goldmann, Bettina Gürtl, Kristaps Klavins, Christoph Klimek, Sabrina Lindinger, Eva Liñeiro-Retes, André C. Müller, Svenja Onstein, Gregor Redinger, Daniela Reil, Vitaly Sedlyarov, Gernot Wolf, Matthew Crawford, Robert Everley, David Hepworth, Shenping Liu, Stephen Noell, Mary Pio
Published in: Nature Reviews Drug Discovery, Issue 19/7, 2020, Page(s) 429-430, ISSN 1474-1776
Publisher: Nature Publishing Group
DOI: 10.1038/d41573-020-00056-6

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