Enhanced Networking on Antimicrobial Resistance Surveillance with Next Generation Sequencing

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Report of planned communication activities
Training enabling self-sustainability
Final report of completed communication activities
Half-time report of completed communication activities

Halftime report of completed communication activities

Training on pre- and post-awarded systems and processes

Training on pre and postawarded systems and processes

Publications

Multiple Benefits of Plasmid-Mediated Quinolone Resistance Determinants in Klebsiella pneumoniae ST11 High-Risk Clone and Recently Emerging ST307 Clone

Author(s): Judit Domokos, Ivelina Damjanova, Katalin Kristof, Balazs Ligeti, Bela Kocsis, Dora Szabo
Published in: Frontiers in Microbiology, Issue 10, 2019, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2019.00157

Insights into the evolution of the mutational resistome of Pseudomonas aeruginosa in cystic fibrosis

Author(s): Carla López-Causapé, Antonio Oliver
Published in: Future Microbiology, Issue 12/16, 2017, Page(s) 1445-1448, ISSN 1746-0913
Publisher: Future Medicine Ltd.
DOI: 10.2217/fmb-2017-0197

Pseudomonas aeruginosa epidemic high-risk clones and their association with horizontally-acquired β-lactamases: 2020 update

Author(s): Ester del Barrio-Tofiño, Carla López-Causapé, Antonio Oliver
Published in: International Journal of Antimicrobial Agents, Issue 56/6, 2020, Page(s) 106196, ISSN 0924-8579
Publisher: Elsevier BV
DOI: 10.1016/j.ijantimicag.2020.106196

Molecular and biochemical insights into the in vivo evolution of AmpC-mediated resistance to ceftolozane/tazobactam during treatment of an MDR Pseudomonas aeruginosa infection

Author(s): Jorge Arca-Suárez, Juan Carlos Vázquez-Ucha, Pablo Arturo Fraile-Ribot, Emilio Lence, Gabriel Cabot, Marta Martínez-Guitián, Cristina Lasarte-Monterrubio, Manuel Rodríguez-Iglesias, Alejandro Beceiro, Concepción González-Bello, Fátima Galán-Sánchez, Antonio Oliver, Germán Bou
Published in: Journal of Antimicrobial Chemotherapy, Issue 75/11, 2020, Page(s) 3209-3217, ISSN 0305-7453
Publisher: Oxford University Press
DOI: 10.1093/jac/dkaa291

Ceftolozane/tazobactam for the treatment of multidrug resistant Pseudomonas aeruginosa: experience from the Balearic Islands

Author(s): Manuel Díaz-Cañestro, Leonor Periañez, Xavier Mulet, M. Luisa Martin-Pena, Pablo A. Fraile-Ribot, Ignacio Ayestarán, Asunción Colomar, Belén Nuñez, Maria Maciá, Andrés Novo, Vicente Torres, Javier Asensio, Carla López-Causapé, Olga Delgado, José Luis Pérez, Javier Murillas, Melchor Riera, Antonio Oliver
Published in: European Journal of Clinical Microbiology & Infectious Diseases, Issue 37/11, 2018, Page(s) 2191-2200, ISSN 0934-9723
Publisher: Springer Verlag
DOI: 10.1007/s10096-018-3361-0

The Versatile Mutational Resistome of Pseudomonas aeruginosa

Author(s): Carla López-Causapé, Gabriel Cabot, Ester del Barrio-Tofiño, Antonio Oliver
Published in: Frontiers in Microbiology, Issue 9, 2018, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2018.00685

Evaluation of colistin stability in agar and comparison of four methods for MIC testing of colistin

Author(s): Agata Turlej-Rogacka, Basil Britto Xavier, Lore Janssens, Christine Lammens, Olympia Zarkotou, Spyros Pournaras, Herman Goossens, Surbhi Malhotra-Kumar
Published in: European Journal of Clinical Microbiology & Infectious Diseases, Issue 37/2, 2018, Page(s) 345-353, ISSN 0934-9723
Publisher: Springer Verlag
DOI: 10.1007/s10096-017-3140-3

In Vivo Emergence of Resistance to Novel Cephalosporin–β-Lactamase Inhibitor Combinations through the Duplication of Amino Acid D149 from OXA-2 β-Lactamase (OXA-539) in Sequence Type 235 Pseudomonas aeruginosa

Author(s): Pablo A. Fraile-Ribot, Xavier Mulet, Gabriel Cabot, Ester del Barrio-Tofiño, Carlos Juan, José L. Pérez, Antonio Oliver
Published in: Antimicrobial Agents and Chemotherapy, Issue 61/9, 2017, ISSN 0066-4804
Publisher: American Society for Microbiology
DOI: 10.1128/aac.01117-17

Emergence of colistin resistance during treatment of recurrent pneumonia caused by carbapenemase producing Klebsiella pneumoniae

Author(s): Veerle Matheeussen, Basil Britto Xavier, Ingrid Mermans, Annick De Weerdt, Christine Lammens, Herman Goossens, Hilde Jansens, Surbhi Malhotra-Kumar
Published in: Diagnostic Microbiology and Infectious Disease, Issue 94/4, 2019, Page(s) 407-409, ISSN 0732-8893
Publisher: Elsevier BV
DOI: 10.1016/j.diagmicrobio.2019.02.014

Molecular mechanisms driving the in vivo development of OXA-10-mediated resistance to ceftolozane/tazobactam and ceftazidime/avibactam during treatment of XDR Pseudomonas aeruginosa infections

Author(s): Jorge Arca-Suárez, Cristina Lasarte-Monterrubio, Bruno-Kotska Rodiño-Janeiro, Gabriel Cabot, Juan Carlos Vázquez-Ucha, Manuel Rodríguez-Iglesias, Fátima Galán-Sánchez, Alejandro Beceiro, Concepción González-Bello, Antonio Oliver, Germán Bou
Published in: Journal of Antimicrobial Chemotherapy, 2020, ISSN 0305-7453
Publisher: Oxford University Press
DOI: 10.1093/jac/dkaa396

Evolution of the Pseudomonas aeruginosa Aminoglycoside Mutational Resistome In Vitro and in the Cystic Fibrosis Setting

Author(s): Carla López-Causapé, Rosa Rubio, Gabriel Cabot, Antonio Oliver
Published in: Antimicrobial Agents and Chemotherapy, Issue 62/4, 2018, ISSN 0066-4804
Publisher: American Society for Microbiology
DOI: 10.1128/aac.02583-17

Plasmid copy number and qnr gene expression in selection of fluoroquinolone-resistant Escherichia coli

Author(s): Dániel Gulyás, Béla Kocsis, Dóra Szabó
Published in: Acta Microbiologica et Immunologica Hungarica, Issue 66/2, 2019, Page(s) 169-178, ISSN 1217-8950
Publisher: Akademiai Kiado
DOI: 10.1556/030.65.2018.049

Worsening epidemiological situation of carbapenemase-producing Enterobacteriaceae in Europe, assessment by national experts from 37 countries, July 2018

Author(s): Alma Brolund, Nina Lagerqvist, Sara Byfors, Marc J Struelens, Dominique L Monnet, Barbara Albiger, Anke Kohlenberg
Published in: Eurosurveillance, Issue 24/9, 2019, ISSN 1560-7917
Publisher: European Centre for Disease Prevention and Control
DOI: 10.2807/1560-7917.es.2019.24.9.1900123

Contribution of OqxAB Efflux Pump in Selection of Fluoroquinolone-Resistant Klebsiella pneumoniae

Author(s): Orsolya Szabo, Bela Kocsis, Nikolett Szabo, Katalin Kristof, Dora Szabo
Published in: Canadian Journal of Infectious Diseases and Medical Microbiology, Issue 2018, 2018, Page(s) 1-5, ISSN 1712-9532
Publisher: Pulsus Group Inc.
DOI: 10.1155/2018/4271638

Epidemic spread of OXA-48 beta-lactamase in Croatia

Author(s): Branka Bedenić, Mia Slade, Lidija Žele Starčević, Sanda Sardelić, Mirna Vranić-Ladavac, Ana Benčić, Vlasta Zujić Atalić, Maja Bogdan, Marina Bubonja-Šonje, Maja Tomić-Paradžik, Tatjana Tot, Amarela Lukić-Grlić, Domagoj Drenjančević, Dijana Varda-Brkić, Daniela Bandić-Pavlović, Slobodan Mihaljević, Gernot Zarfel, Marija Gužvinec, Rick Conzemius, Ivan Barišić, Arjana Tambić-
Published in: Journal of Medical Microbiology, Issue 67/8, 2018, Page(s) 1031-1041, ISSN 0022-2615
Publisher: Society for General Microbiology
DOI: 10.1099/jmm.0.000777

Characterization of carbapenemase-producing Enterobacteriaceae from colonized patients in a university hospital in Madrid, Spain, during the R-GNOSIS project depicts increased clonal diversity over time with maintenance of high-risk clones

Author(s): Marta Hernández-García, Blanca Pérez-Viso, M Carmen Turrientes, Cristina Díaz-Agero, Nieves López-Fresneña, Marc Bonten, Surbhi Malhotra-Kumar, Patricia Ruiz-Garbajosa, Rafael Cantón
Published in: Journal of Antimicrobial Chemotherapy, Issue 73/11, 2018, Page(s) 3039-3043, ISSN 0305-7453
Publisher: Oxford University Press
DOI: 10.1093/jac/dky284

Optimization of an in vitro gut microbiome biotransformation platform with chlorogenic acid as model compound: From fecal sample to biotransformation product identification

Author(s): Olivier Mortelé, Elias Iturrospe, Annelies Breynaert, Eline Verdickt, Basil Britto Xavier, Christine Lammens, Surbhi Malhotra-Kumar, Philippe G. Jorens, Luc Pieters, Alexander L.N. van Nuijs, Nina Hermans
Published in: Journal of Pharmaceutical and Biomedical Analysis, Issue 175, 2019, Page(s) 112768, ISSN 0731-7085
Publisher: Elsevier BV
DOI: 10.1016/j.jpba.2019.07.016

Activity of ceftazidime–avibactam against multidrug-resistance Enterobacteriaceae expressing combined mechanisms of resistance

Author(s): Inmaculada López-Hernández, Noemí Alonso, Marta Fernández-Martínez, Laura Zamorano, Alba Rivera, Antonio Oliver, M. Carmen Conejo, Luis Martínez-Martínez, Ferrán Navarro, Alvaro Pascual
Published in: Enfermedades Infecciosas y Microbiología Clínica, Issue 35/8, 2017, Page(s) 499-504, ISSN 0213-005X
Publisher: Ediciones Doyma S.A.
DOI: 10.1016/j.eimc.2016.09.013

Abundance of Colistin-Resistant, OXA-23- and ArmA-Producing Acinetobacter baumannii Belonging to International Clone 2 in Greece

Author(s): Mattia Palmieri, Marco Maria D’Andrea, Andreu Coello Pelegrin, Nadine Perrot, Caroline Mirande, Bernadette Blanc, Nicholas Legakis, Herman Goossens, Gian Maria Rossolini, Alex van Belkum
Published in: Frontiers in Microbiology, Issue 11, 2020, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2020.00668

Double-Serine Fluoroquinolone Resistance Mutations Advance Major International Clones and Lineages of Various Multi-Drug Resistant Bacteria

Author(s): Miklos Fuzi, Dora Szabo, Rita Csercsik
Published in: Frontiers in Microbiology, Issue 8, 2017, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2017.02261

Identification of mcr-8 in Clinical Isolates From Qatar and Evaluation of Their Antimicrobial Profiles

Author(s): Nahla O. Eltai, Brianna Kelly, Hassan A. Al-Mana, Emad B. Ibrahim, Hadi M. Yassine, Asmaa Al Thani, Muna Al Maslmani, Christine Lammens, Basil B. Xavier, Surbhi Malhotra-Kumar
Published in: Frontiers in Microbiology, Issue 11, 2020, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2020.01954

Bladder cancer-related microbiota: examining differences in urine and tissue samples

Author(s): Bassel Mansour, Ádám Monyók, Nóra Makra, Márió Gajdács, István Vadnay, Balázs Ligeti, János Juhász, Dóra Szabó, Eszter Ostorházi
Published in: Scientific Reports, Issue 10/1, 2020, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-020-67443-2

Identifying and exploiting genes that potentiate the evolution of antibiotic resistance

Author(s): Danna R. Gifford, Victoria Furió, Andrei Papkou, Tom Vogwill, Antonio Oliver, R. Craig MacLean
Published in: Nature Ecology & Evolution, Issue 2/6, 2018, Page(s) 1033-1039, ISSN 2397-334X
Publisher: Nature Ecology & Evolution
DOI: 10.1038/s41559-018-0547-x

Molecular Characterization of β-Lactam Resistance and Antimicrobial Susceptibility to Possible Therapeutic Options of AmpC-Producing Multidrug-Resistant Proteus mirabilis in a University Hospital of Split, Croatia

Author(s): Zana Rubic, Silvija Soprek, Marko Jelic, Anita Novak, Ivana Goic-Barisic, Marina Radic, Arjana Tambic-Andrasevic, Marija Tonkic
Published in: Microbial Drug Resistance, 2020, ISSN 1076-6294
Publisher: Mary Ann Liebert Inc.
DOI: 10.1089/mdr.2020.0002

Challenging Antimicrobial Susceptibility and Evolution of Resistance (OXA-681) during Treatment of a Long-Term Nosocomial Infection Caused by a Pseudomonas aeruginosa ST175 Clone

Author(s): Jorge Arca-Suárez, Pablo Fraile-Ribot, Juan Carlos Vázquez-Ucha, Gabriel Cabot, Marta Martínez-Guitián, Emilio Lence, Concepción González-Bello, Alejandro Beceiro, Manuel Rodríguez-Iglesias, Fátima Galán-Sánchez, Germán Bou, Antonio Oliver
Published in: Antimicrobial Agents and Chemotherapy, Issue 63/10, 2019, ISSN 0066-4804
Publisher: American Society for Microbiology
DOI: 10.1128/aac.01110-19

Genomic Epidemiology of Carbapenem- and Colistin-Resistant Klebsiella pneumoniae Isolates From Serbia: Predominance of ST101 Strains Carrying a Novel OXA-48 Plasmid

Author(s): Mattia Palmieri, Marco Maria D’Andrea, Andreu Coello Pelegrin, Caroline Mirande, Snezana Brkic, Ivana Cirkovic, Herman Goossens, Gian Maria Rossolini, Alex van Belkum
Published in: Frontiers in Microbiology, Issue 11, 2020, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2020.00294

Potential in vivo transfer of a blaCTX-M14-harbouring plasmid established by combining long- and short-read sequencing

Author(s): Basil Britto Xavier, Gesuele Renzi, Christine Lammens, Abdessalam Cherkaoui, Herman Goossens, Jacques Schrenzel, Stephan Harbarth, Surbhi Malhotra-Kumar
Published in: Journal of Microbiological Methods, Issue 159, 2019, Page(s) 1-4, ISSN 0167-7012
Publisher: Elsevier BV
DOI: 10.1016/j.mimet.2019.02.004

Emergence of colistin resistance in Enterobacter aerogenes from Croatia

Author(s): Branka Bedenić, Mirna Vranić-Ladavac, Carolina Venditti, Arjana Tambić-Andrašević, Nada Barišić, Marija Gužvinec, Natalie Karčić, Nicola Petrosillo, Ranko Ladavac, Antonino di Caro
Published in: Journal of Chemotherapy, Issue 30/2, 2017, Page(s) 120-123, ISSN 1120-009X
Publisher: Maney Publishing
DOI: 10.1080/1120009x.2017.1382121

In Vitro and In Vivo Activities of β-Lactams in Combination with the Novel β-Lactam Enhancers Zidebactam and WCK 5153 against Multidrug-Resistant Metallo-β-Lactamase-Producing Klebsiella pneumoniae

Author(s): Bartolome Moya, Isabel M. Barcelo, Gabriel Cabot, Gabriel Torrens, Snehal Palwe, Prashant Joshi, Kushal Umarkar, Swapna Takalkar, Hariharan Periasamy, Sachin Bhagwat, Mahesh Patel, German Bou, Antonio Oliver
Published in: Antimicrobial Agents and Chemotherapy, Issue 63/5, 2019, ISSN 0066-4804
Publisher: American Society for Microbiology
DOI: 10.1128/aac.00128-19

Prevalencia en España de mecanismos de resistencia a quinolonas en enterobacterias productoras de betalactamasas de clase C adquiridas y/o carbapenemasas

Author(s): Jesús Machuca, Jesús Agüero, Elisenda Miró, María del Carmen Conejo, Jesús Oteo, Germán Bou, Juan José González-López, Antonio Oliver, Ferran Navarro, Álvaro Pascual, Luis Martínez-Martínez
Published in: Enfermedades Infecciosas y Microbiología Clínica, Issue 35/8, 2017, Page(s) 487-492, ISSN 0213-005X
Publisher: Ediciones Doyma S.A.
DOI: 10.1016/j.eimc.2016.05.006

Emergence of Resistance to Novel β-Lactam–β-Lactamase Inhibitor Combinations Due to Horizontally Acquired AmpC (FOX-4) in Pseudomonas aeruginosa Sequence Type 308

Author(s): Pablo A. Fraile-Ribot, Cristóbal del Rosario-Quintana, Carla López-Causapé, María A. Gomis-Font, Mar Ojeda-Vargas, Antonio Oliver
Published in: Antimicrobial Agents and Chemotherapy, Issue 64/1, 2019, ISSN 0066-4804
Publisher: American Society for Microbiology
DOI: 10.1128/aac.02112-19

Antimicrobial consumption and resistance in adult hospital inpatients in 53 countries: results of an internet-based global point prevalence survey

Author(s): Ann Versporten, Peter Zarb, Isabelle Caniaux, Marie-Françoise Gros, Nico Drapier, Mark Miller, Vincent Jarlier, Dilip Nathwani, Herman Goossens, Andi Koraqi, Iris Hoxha, Silva Tafaj, Denada Lacej, Martin Hojman, Rodolfo Ernesto Quiros, Lilit Ghazaryan, Kelly A Cairns, Allen Cheng, Kylie C Horne, Fiona F Doukas, Thomas Gottlieb, Jameela Alsalman, Koen Magerman, Gounongbe YT Marielle, Amela Dedeic
Published in: The Lancet Global Health, Issue 6/6, 2018, Page(s) e619-e629, ISSN 2214-109X
Publisher: Elsevier BV
DOI: 10.1016/s2214-109x(18)30186-4

Quality of molecular detection of vancomycin resistance in enterococci: results of 6 consecutive years of Quality Control for Molecular Diagnostics (QCMD) external quality assessment

Author(s): Veerle Matheeussen, Katherine Loens, Calum Scott, Caterina Di Lorenzo, Elaine McCulloch, Oliver Donoso Mantke, Herman Goossens, Paul Wallace, Margareta Ieven
Published in: European Journal of Clinical Microbiology & Infectious Diseases, Issue 38/9, 2019, Page(s) 1633-1641, ISSN 0934-9723
Publisher: Springer Verlag
DOI: 10.1007/s10096-019-03591-2

Characterization of macrolide resistance in bacteria isolated from macrolide-polluted and unpolluted river sediments and clinical sources in Croatia

Author(s): Milena Milaković, Stela Križanović, Ines Petrić, Ana Šimatović, Juan J. González-Plaza, Marija Gužvinec, Arjana Tambić Andrašević, Lucia Pole, Mirna Mrkonjić Fuka, Nikolina Udiković-Kolić
Published in: Science of The Total Environment, Issue 749, 2020, Page(s) 142357, ISSN 0048-9697
Publisher: Elsevier BV
DOI: 10.1016/j.scitotenv.2020.142357

Emergence of high-level and stable metronidazole resistance in Clostridioides difficile

Author(s): Ricardo M. Arcay, Loreto Suárez-Bode, Carla López-Causapé, Antonio Oliver, Ana Mena
Published in: International Journal of Antimicrobial Agents, Issue 55/1, 2020, Page(s) 105830, ISSN 0924-8579
Publisher: Elsevier BV
DOI: 10.1016/j.ijantimicag.2019.10.011

Acquired qnrVC1 and bla NDM-1 resistance markers in an international high-risk Pseudomonas aeruginosa ST773 clone

Author(s): Bela Kocsis, Akos Toth, Daniel Gulyas, Balazs Ligeti, Katalin Katona, Laszlo Rokusz, Dora Szabo
Published in: Journal of Medical Microbiology, Issue 68/3, 2019, Page(s) 336-338, ISSN 0022-2615
Publisher: Society for General Microbiology
DOI: 10.1099/jmm.0.000927

Impact of antibiotic consumption on the carriage of antibiotic-resistant bacteria by school children

Author(s): Maja Farkaš, Tatjana Čulina, Jadranka Sišul, Gordana Pelčić, Martina Mavrinac, Vladimir Mićović, Arjana Tambić Andrašević
Published in: European Journal of Public Health, Issue 30/2, 2019, Page(s) 265-269, ISSN 1101-1262
Publisher: Oxford University Press
DOI: 10.1093/eurpub/ckz137

Antimicrobial Resistance Following Azithromycin Mass Drug Administration: Potential Surveillance Strategies to Assess Public Health Impact

Author(s): Ines Mack, Mike Sharland, James A Berkley, Nigel Klein, Surbhi Malhotra-Kumar, Julia Bielicki
Published in: Clinical Infectious Diseases, Issue 70/7, 2019, Page(s) 1501-1508, ISSN 1058-4838
Publisher: University of Chicago Press
DOI: 10.1093/cid/ciz893

Meningitis caused by Campylobacter jejuni: a case presentation and literature review

Author(s): Marija Kusulja, Marija Santini, Karla Margetić, Marija Guzvinec, Silvija Šoprek, Iva Butić, Arjana Tambić Andrašević
Published in: Acta Clinica Belgica, 2020, Page(s) 1-6, ISSN 1784-3286
Publisher: Taylor&Francis
DOI: 10.1080/17843286.2020.1721133

Predicting antimicrobial resistance in Pseudomonas aeruginosa with machine learning‐enabled molecular diagnostics

Author(s): Ariane Khaledi, Aaron Weimann, Monika Schniederjans, Ehsaneddin Asgari, Tzu‐Hao Kuo, Antonio Oliver, Gabriel Cabot, Axel Kola, Petra Gastmeier, Michael Hogardt, Daniel Jonas, Mohammad RK Mofrad, Andreas Bremges, Alice C McHardy, Susanne Häussler
Published in: EMBO Molecular Medicine, Issue 12/3, 2020, ISSN 1757-4676
Publisher: John Wiley & Sons Ltd.
DOI: 10.15252/emmm.201910264

Adding Insult to Injury: Mechanistic Basis for How AmpC Mutations Allow Pseudomonas aeruginosa To Accelerate Cephalosporin Hydrolysis and Evade Avibactam

Author(s): Cole L. Slater, Judith Winogrodzki, Pablo A. Fraile-Ribot, Antonio Oliver, Mazdak Khajehpour, Brian L. Mark
Published in: Antimicrobial Agents and Chemotherapy, Issue 64/9, 2020, ISSN 0066-4804
Publisher: American Society for Microbiology
DOI: 10.1128/aac.00894-20

Successful containment of the first KPC-producing Klebsiella pneumoniae outbreak in Croatia

Author(s): Dijana Varda Brkic, Irina Pristas, Ivan Cipris, Marko Jelic, Iva Butic, Arjana Tambic Andrasevic
Published in: Future Microbiology, Issue 12/11, 2017, Page(s) 967-974, ISSN 1746-0913
Publisher: Future Medicine Ltd.
DOI: 10.2217/fmb-2016-0143

Altered Gut Microbiota Is Present in Newly Diagnosed Pediatric Patients With Inflammatory Bowel Disease

Author(s): Sara Sila, Marko Jelić, Ivana Trivić, Arjana Tambić Andrašević, Iva Hojsak, Sanja Kolaček
Published in: Journal of Pediatric Gastroenterology and Nutrition, Issue 70/4, 2020, Page(s) 497-502, ISSN 0277-2116
Publisher: Lippincott Williams & Wilkins Ltd.
DOI: 10.1097/mpg.0000000000002611

Epidemiología y mecanismos de resistencia a carbapenemas en Pseudomonas aeruginosa : papel de los clones de alto riesgo en la multirresistencia

Author(s): Antonio Oliver
Published in: Enfermedades Infecciosas y Microbiología Clínica, Issue 35/3, 2017, Page(s) 137-138, ISSN 0213-005X
Publisher: Ediciones Doyma S.A.
DOI: 10.1016/j.eimc.2016.11.006

In vitro dynamics and mechanisms of resistance development to imipenem and imipenem/relebactam in Pseudomonas aeruginosa

Author(s): María A Gomis-Font, Gabriel Cabot, Irina Sánchez-Diener, Pablo A Fraile-Ribot, Carlos Juan, Bartolome Moya, Laura Zamorano, Antonio Oliver
Published in: Journal of Antimicrobial Chemotherapy, Issue 75/9, 2020, Page(s) 2508-2515, ISSN 0305-7453
Publisher: Oxford University Press
DOI: 10.1093/jac/dkaa206

Fluoroquinolone resistance in Escherichia coli isolates after exposure to non-fluoroquinolone antibiotics: a retrospective case–control study

Author(s): Linda E Chaname Pinedo, Robin Bruyndonckx, Boudewijn Catry, Katrien Latour, Herman Goossens, Steven Abrams, Samuel Coenen
Published in: Journal of Antimicrobial Chemotherapy, Issue 75/7, 2020, Page(s) 1985-1992, ISSN 0305-7453
Publisher: Oxford University Press
DOI: 10.1093/jac/dkaa128

Distinct epidemiology and resistance mechanisms affecting ceftolozane/tazobactam in Pseudomonas aeruginosa isolates recovered from ICU patients in Spain and Portugal depicted by WGS

Author(s): Marta Hernández-García, María García-Castillo, Sergio García-Fernández, José Melo-Cristino, Margarida F Pinto, Elsa Gonçalves, Valquíria Alves, Ana Raquel Vieira, Elmano Ramalheira, Luísa Sancho, José Diogo, Rui Ferreira, Tânia Silva, Catarina Chaves, Germán Bou, Emilia Cercenado, Mercedes Delgado-Valverde, Antonio Oliver, Cristina Pitart, Jesús Rodríguez-Lozano, Nuria Tormo, João
Published in: Journal of Antimicrobial Chemotherapy, 2020, ISSN 0305-7453
Publisher: Oxford University Press
DOI: 10.1093/jac/dkaa430

Characterization of AmpC β-lactamase mutations of extensively drug-resistant Pseudomonas aeruginosa isolates that develop resistance to ceftolozane/tazobactam during therapy

Author(s): Marta Fernández-Esgueva, Ana Isabel López-Calleja, Xavier Mulet, Pablo A. Fraile-Ribot, Gabriel Cabot, Rafael Huarte, Antonio Rezusta, Antonio Oliver
Published in: Enfermedades Infecciosas y Microbiología Clínica, 2020, ISSN 0213-005X
Publisher: Ediciones Doyma S.A.
DOI: 10.1016/j.eimc.2020.01.017

BacPipe: A Rapid, User-Friendly Whole-Genome Sequencing Pipeline for Clinical Diagnostic Bacteriology

Author(s): Basil B. Xavier, Mohamed Mysara, Mattia Bolzan, Bruno Ribeiro-Gonçalves, Blaise T.F. Alako, Peter Harrison, Christine Lammens, Samir Kumar-Singh, Herman Goossens, João A. Carriço, Guy Cochrane, Surbhi Malhotra-Kumar
Published in: iScience, Issue 23/1, 2020, Page(s) 100769, ISSN 2589-0042
Publisher: iScience
DOI: 10.1016/j.isci.2019.100769

Surveillance for control of antimicrobial resistance

Author(s): Evelina Tacconelli, Frangiscos Sifakis, Stephan Harbarth, Remco Schrijver, Maaike van Mourik, Andreas Voss, Mike Sharland, Nithya Babu Rajendran, Jesús Rodríguez-Baño, Julia Bielicki, Marlieke de Kraker, Sumanth Gandra, Petra Gastmeier, Kim Gilchrist, Achilleas Gikas, Beryl Primrose Gladstone, Herman Goossens, Hasan Jafri, Gunnar Kahlmeter, Frank Leus, Christine Luxemburger, Surbhi Malhotra-Kum
Published in: The Lancet Infectious Diseases, Issue 18/3, 2018, Page(s) e99-e106, ISSN 1473-3099
Publisher: The Lancet Publishing Group
DOI: 10.1016/s1473-3099(17)30485-1

Spanish nationwide survey on Pseudomonas aeruginosa antimicrobial resistance mechanisms and epidemiology

Author(s): Ester del Barrio-Tofiño, Laura Zamorano, Sara Cortes-Lara, Carla López-Causapé, Irina Sánchez-Diener, Gabriel Cabot, Germán Bou, Luis Martínez-Martínez, Antonio Oliver, Fátima Galán, Irene Gracia, Manuel Antonio Rodríguez, Lina Martín, Juan Manuel Sánchez, Laura Viñuela, Mª Victoria García, José Antonio Lepe, Javier Aznar, Inma López-Hernández, Cristina Seral, Francisco Javier Ca
Published in: Journal of Antimicrobial Chemotherapy, Issue 74/7, 2019, Page(s) 1825-1835, ISSN 0305-7453
Publisher: Oxford University Press
DOI: 10.1093/jac/dkz147

Activity of Imipenem-Relebactam against a Large Collection of Pseudomonas aeruginosa Clinical Isolates and Isogenic β-Lactam-Resistant Mutants

Author(s): Pablo A. Fraile-Ribot, Laura Zamorano, Rocío Orellana, Ester del Barrio-Tofiño, Irina Sánchez-Diener, Sara Cortes-Lara, Carla López-Causapé, Gabriel Cabot, Germán Bou, Luis Martínez-Martínez, Antonio Oliver, Fátima Galán, Irene Gracia, Manuel Antonio Rodríguez, Lina Martín, Juan Manuel Sánchez, Laura Viñuela, Ma Victoria García, José Antonio Lepe, Javier Aznar, Inma López-Hernánd
Published in: Antimicrobial Agents and Chemotherapy, Issue 64/2, 2020, ISSN 0066-4804
Publisher: American Society for Microbiology
DOI: 10.1128/aac.02165-19

Novel composite SCCmec type III element in ST239 MRSA isolated from an Indian hospital

Author(s): Jasmine Coppens, Basil Britto Xavier, Lavanya Vanjari, Sarah De Backer, Christine Lammens, Lakshmi Vemu, Herman Goossens, Surbhi Malhotra-Kumar
Published in: Journal of Antimicrobial Chemotherapy, 2018, ISSN 0305-7453
Publisher: Oxford University Press
DOI: 10.1093/jac/dky399

Efficacy of Ceftolozane-Tazobactam in Combination with Colistin against Extensively Drug-Resistant Pseudomonas aeruginosa , Including High-Risk Clones, in an In Vitro Pharmacodynamic Model

Author(s): María Montero, Sandra Domene Ochoa, Carla López-Causapé, Brian VanScoy, Sonia Luque, Luisa Sorlí, Núria Campillo, Ariadna Angulo-Brunet, Eduardo Padilla, Núria Prim, Virginia Pomar, Alba Rivera, Santiago Grau, Paul G. Ambrose, Antonio Oliver, Juan P. Horcajada
Published in: Antimicrobial Agents and Chemotherapy, Issue 64/4, 2020, ISSN 0066-4804
Publisher: American Society for Microbiology
DOI: 10.1128/aac.02542-19

MgrB variants in colistin-susceptible and colistin-resistant Klebsiella pneumoniae ST258

Author(s): Béla Kocsis, Béla Kádár, Ákos Tóth, Alexandra Fullár, Dóra Szabó
Published in: Journal of Microbiology, Immunology and Infection, Issue 50/5, 2017, Page(s) 735-736, ISSN 1684-1182
Publisher: Elsevier Taiwan
DOI: 10.1016/j.jmii.2016.06.008

Remarkable Genome Stability among emm1 Group A Streptococcus in Belgium over 19 Years

Author(s): Jasmine Coppens, Basil Britto Xavier, Katherine Loens, Christine Lammens, Margareta Ieven, Veerle Matheeussen, Herman Goossens, Surbhi Malhotra-Kumar
Published in: Genome Biology and Evolution, Issue 11/5, 2019, Page(s) 1432-1439, ISSN 1759-6653
Publisher: Oxford University Press
DOI: 10.1093/gbe/evz093

Clonal transmission of multidrug-resistant Acinetobacter baumannii harbouring blaOXA-24-like and blaOXA-23-like genes in a tertiary hospital in Albania

Author(s): Silva Tafaj, Tomislav Kostyanev, Basil B. Xavier, Ad C. Fluit, Célia F. Rodrigues, Christine Lammens, Damiana Osmalli, Lul Raka, Herman Goossens, Surbhi Malhotra-Kumar, Marc J.M. Bonten
Published in: Journal of Global Antimicrobial Resistance, Issue 23, 2020, Page(s) 79-81, ISSN 2213-7165
Publisher: Elsevier BV
DOI: 10.1016/j.jgar.2020.07.026

Plasmid-mediated quinolone resistance determinants in Enterobacteriaceae from urine clinical samples

Author(s): Orsolya Szabó, Dániel Gulyás, Nikolett Szabó, Katalin Kristóf, Béla Kocsis, Dóra Szabó
Published in: Acta Microbiologica et Immunologica Hungarica, 2018, Page(s) 1-11, ISSN 1217-8950
Publisher: Akademiai Kiado
DOI: 10.1556/030.65.2018.012

Validation of MALDI-TOF for the early detection of the ST175 high-risk clone of Pseudomonas aeruginosa in clinical isolates belonging to a Spanish nationwide multicenter study

Author(s): Xavier Mulet, Marta Fernández-Esgueva, Cristina Norte, Laura Zamorano, Ester del Barrio-Tofiño, Antonio Oliver
Published in: Enfermedades Infecciosas y Microbiología Clínica, 2020, ISSN 0213-005X
Publisher: Ediciones Doyma S.A.
DOI: 10.1016/j.eimc.2020.05.022

Healthy Siblings of Children With Crohn's Disease Exhibit More Rapid Changes in Microbiota Composition as a Response to Exclusive Enteral Nutrition

Author(s): Sara Sila, Marko Jelić, Ivana Trivić, Arjana Tambić Andrašević, Sanja Kolaček, Iva Hojsak
Published in: Journal of Parenteral and Enteral Nutrition, 2020, ISSN 0148-6071
Publisher: SAGE Publications
DOI: 10.1002/jpen.1981

Pathogenic characteristics of Pseudomonas aeruginosa bacteraemia isolates in a high-endemicity setting for ST175 and ST235 high-risk clones

Author(s): Raúl Recio, Irina Sánchez-Diener, Esther Viedma, María Ángeles Meléndez-Carmona, Jennifer Villa, María Ángeles Orellana, Mikel Mancheño, Carlos Juan, Laura Zamorano, Jaime Lora-Tamayo, Fernando Chaves, Antonio Oliver
Published in: European Journal of Clinical Microbiology & Infectious Diseases, Issue 39/4, 2020, Page(s) 671-678, ISSN 0934-9723
Publisher: Springer Verlag
DOI: 10.1007/s10096-019-03780-z

Emergence of antimicrobial resistance to Pseudomonas aeruginosa in the intensive care unit: association with the duration of antibiotic exposure and mode of administration

Author(s): Erlangga Yusuf, Bruno Van Herendael, Walter Verbrugghe, Margareta Ieven, Emiel Goovaerts, Kristof Bergs, Kristien Wouters, Philippe G. Jorens, Herman Goossens
Published in: Annals of Intensive Care, Issue 7/1, 2017, ISSN 2110-5820
Publisher: Springer-Verlag GmbH and Co. KG
DOI: 10.1186/s13613-017-0296-z

Mechanisms leading to in vivo ceftolozane/tazobactam resistance development during the treatment of infections caused by MDR Pseudomonas aeruginosa

Author(s): Pablo A Fraile-Ribot, Gabriel Cabot, Xavier Mulet, Leonor Periañez, M Luisa Martín-Pena, Carlos Juan, José L Pérez, Antonio Oliver
Published in: Journal of Antimicrobial Chemotherapy, Issue 73/3, 2017, Page(s) 658-663, ISSN 0305-7453
Publisher: Oxford University Press
DOI: 10.1093/jac/dkx424

EUropean prospective cohort study on Enterobacteriaceae showing REsistance to CArbapenems (EURECA): a protocol of a European multicentre observational study

Author(s): Belén Gutiérrez-Gutiérrez, Jesús Sojo-Dorado, José Bravo-Ferrer, Nienke Cuperus, Marlieke de Kraker, Tomislav Kostyanev, Lul Raka, George Daikos, Jan Feifel, Laura Folgori, Alvaro Pascual, Herman Goossens, Seamus O'Brien, Marc J M Bonten, Jesús Rodríguez-Baño
Published in: BMJ Open, Issue 7/4, 2017, Page(s) e015365, ISSN 2044-6055
Publisher: BMJ Publishing Group
DOI: 10.1136/bmjopen-2016-015365

Evaluation of Ceftolozane-Tazobactam in Combination with Meropenem against Pseudomonas aeruginosa Sequence Type 175 in a Hollow-Fiber Infection Model

Author(s): M. Montero, Brian D. VanScoy, Carla López-Causapé, Haley Conde, Jonathan Adams, Concepción Segura, Laura Zamorano, Antonio Oliver, Juan P. Horcajada, Paul G. Ambrose
Published in: Antimicrobial Agents and Chemotherapy, Issue 62/5, 2018, ISSN 0066-4804
Publisher: American Society for Microbiology
DOI: 10.1128/aac.00026-18

The COMPARE Data Hubs

Author(s): Clara Amid, Nima Pakseresht, Nicole Silvester, Suran Jayathilaka, Ole Lund, Lukasz D Dynovski, Bálint Á Pataki, Dávid Visontai, Basil Britto Xavier, Blaise T F Alako, Ariane Belka, Jose L B Cisneros, Matthew Cotten, George B Haringhuizen, Peter W Harrison, Dirk Höper, Sam Holt, Camilla Hundahl, Abdulrahman Hussein, Rolf S Kaas, Xin Liu, Rasko Leinonen, Surbhi Malhotra-Kumar, David F Nieuwenhui
Published in: Database, Issue 2019, 2019, ISSN 1758-0463
Publisher: Oxford University Press
DOI: 10.1093/database/baz136

Ciprofloxacin Promoted qnrD Expression and Phylogenetic Analysis of qnrD Harboring Plasmids

Author(s): Bela Kocsis, Ama Szmolka, Orsolya Szabo, Daniel Gulyas, Katalin Kristóf, Istvan Göcző, Dora Szabo
Published in: Microbial Drug Resistance, Issue 25/4, 2019, Page(s) 501-508, ISSN 1076-6294
Publisher: Mary Ann Liebert Inc.
DOI: 10.1089/mdr.2018.0245

Lack of Small Intestinal Dysbiosis Following Long-Term Selective Inhibition of Cyclooxygenase-2 by Rofecoxib in the Rat

Author(s): Bernadette Lázár, Gábor Brenner, András Makkos, Mihály Balogh, Szilvia László, Mahmoud Al-Khrasani, Barbara Hutka, Emese Bató, Eszter Ostorházi, János Juhász, Ágnes Kemény, Terézia László, László Tiszlavicz, Zoltán Bihari, Zoltán Giricz, Dóra Szabó, Zsuzsanna Helyes, Péter Ferdinandy, Klára Gyires, Zoltán Zádori
Published in: Cells, Issue 8/3, 2019, Page(s) 251, ISSN 2073-4409
Publisher: MDPI
DOI: 10.3390/cells8030251

Nosocomial outbreak linked to a flexible gastrointestinal endoscope contaminated with an amikacin-resistant ST17 clone of Pseudomonas aeruginosa

Author(s): Felipe Fernández-Cuenca, Lorena López-Cerero, Gabriel Cabot, Antonio Oliver, Julio López-Méndez, Esther Recacha, Inés Portillo, Jesús Rodríguez-Baño, Álvaro Pascual
Published in: European Journal of Clinical Microbiology & Infectious Diseases, Issue 39/10, 2020, Page(s) 1837-1844, ISSN 0934-9723
Publisher: Springer Verlag
DOI: 10.1007/s10096-020-03915-7

Targets for the reduction of antibiotic use in humans in the Transatlantic Taskforce on Antimicrobial Resistance (TATFAR) partner countries

Author(s): Fabio D’Atri, Jacqueline Arthur, Hege Salvesen Blix, Lauri A Hicks, Diamantis Plachouras, Dominique L Monnet
Published in: Eurosurveillance, Issue 24/28, 2019, ISSN 1560-7917
Publisher: European Centre for Disease Prevention and Control
DOI: 10.2807/1560-7917.es.2019.24.28.1800339

Draft Genome Sequences of Four Pseudomonas aeruginosa Isolates Obtained from Patients with Chronic Obstructive Pulmonary Disease

Author(s): Felipe Lira, Guillermo García-León, Antonio Oliver, José L. Martínez
Published in: Genome Announcements, Issue 5/24, 2017, ISSN 2169-8287
Publisher: American Society for Microbiology
DOI: 10.1128/genomea.00147-17

Geographical and temporal variation in the frequency and antimicrobial susceptibility of bacteria isolated from patients hospitalized with bacterial pneumonia: results from 20 years of the SENTRY Antimicrobial Surveillance Program (1997–2016)

Author(s): Helio S Sader, Mariana Castanheira, S J Ryan Arends, Herman Goossens, Robert K Flamm
Published in: Journal of Antimicrobial Chemotherapy, Issue 74/6, 2019, Page(s) 1595-1606, ISSN 0305-7453
Publisher: Oxford University Press
DOI: 10.1093/jac/dkz074

Characterization of Isolates Associated with Emergence of OXA-48-Producing Klebsiella pneumoniae in Croatia

Author(s): Marko Jelić, Jasenka Škrlin, Danijela Bejuk, Iva Košćak, Iva Butić, Marija Gužvinec, Arjana Tambić-Andrašević
Published in: Microbial Drug Resistance, Issue 24/7, 2018, Page(s) 973-979, ISSN 1076-6294
Publisher: Mary Ann Liebert Inc.
DOI: 10.1089/mdr.2017.0168

Genomics and Susceptibility Profiles of Extensively Drug-Resistant Pseudomonas aeruginosa Isolates from Spain

Author(s): Ester del Barrio-Tofiño, Carla López-Causapé, Gabriel Cabot, Alba Rivera, Natividad Benito, Concepción Segura, María Milagro Montero, Luisa Sorlí, Fe Tubau, Silvia Gómez-Zorrilla, Nuria Tormo, Raquel Durá-Navarro, Esther Viedma, Elena Resino-Foz, Marta Fernández-Martínez, Claudia González-Rico, Izaskun Alejo-Cancho, Jose Antonio Martínez, Cristina Labayru-Echverria, Carlos Dueñas, Ign
Published in: Antimicrobial Agents and Chemotherapy, Issue 61/11, 2017, ISSN 0066-4804
Publisher: American Society for Microbiology
DOI: 10.1128/aac.01589-17

Multiplex PCR for detection of plasmid-mediated colistin resistance determinants, mcr-1, mcr-2, mcr-3, mcr-4 and mcr-5 for surveillance purposes

Author(s): Ana Rita Rebelo, Valeria Bortolaia, Jette S Kjeldgaard, Susanne K Pedersen, Pimlapas Leekitcharoenphon, Inge M Hansen, Beatriz Guerra, Burkhard Malorny, Maria Borowiak, Jens Andre Hammerl, Antonio Battisti, Alessia Franco, Patricia Alba, Agnes Perrin-Guyomard, Sophie A Granier, Cristina De Frutos Escobar, Surbhi Malhotra-Kumar, Laura Villa, Alessandra Carattoli, Rene S Hendriksen
Published in: Eurosurveillance, Issue 23/6, 2018, ISSN 1560-7917
Publisher: European Centre for Disease Prevention and Control
DOI: 10.2807/1560-7917.es.2018.23.6.17-00672

First evidence of KPC-producing ST258 Klebsiella pneumoniae in river water

Author(s): M. Jelić, J. Hrenović, S. Dekić, I. Goić-Barišić, A. Tambić Andrašević
Published in: Journal of Hospital Infection, Issue 103/2, 2019, Page(s) 147-150, ISSN 0195-6701
Publisher: W. B. Saunders Co., Ltd.
DOI: 10.1016/j.jhin.2019.04.001

Clinical relevance of bacterial resistance in lower respiratory tract infection in primary care: secondary analysis of a multicentre European trial

Author(s): Jolien Teepe, Berna DL Broekhuizen, Herman Goossens, Patricia Marinka Hordijk, Katherine Loens, Christine Lammens, Margareta Ieven, Paul Little, Chris C Butler, Samuel Coenen, Maciek Godycki-Cwirko, Birgitta Henriques-Normark, Theo JM Verheij
Published in: British Journal of General Practice, Issue 68/674, 2018, Page(s) e627-e632, ISSN 0960-1643
Publisher: Royal College of General Practitioners
DOI: 10.3399/bjgp18x698333

ResFinder 4.0 for predictions of phenotypes from genotypes

Author(s): Valeria Bortolaia, Rolf S Kaas, Etienne Ruppe, Marilyn C Roberts, Stefan Schwarz, Vincent Cattoir, Alain Philippon, Rosa L Allesoe, Ana Rita Rebelo, Alfred Ferrer Florensa, Linda Fagelhauer, Trinad Chakraborty, Bernd Neumann, Guido Werner, Jennifer K Bender, Kerstin Stingl, Minh Nguyen, Jasmine Coppens, Basil Britto Xavier, Surbhi Malhotra-Kumar, Henrik Westh, Mette Pinholt, Muna F Anjum, Nicholas
Published in: Journal of Antimicrobial Chemotherapy, Issue 75/12, 2020, Page(s) 3491-3500, ISSN 0305-7453
Publisher: Oxford University Press
DOI: 10.1093/jac/dkaa345

Synergy Between Proline-Rich Antimicrobial Peptides and Small Molecule Antibiotics Against Selected Gram-Negative Pathogens in vitro and in vivo

Author(s): Laszlo Otvos Jr., Eszter Ostorhazi, Dora Szabo, Steven D. Zumbrun, Lynda L. Miller, Stephanie A. Halasohoris, Puvi D. Desai, Sharon M. Int Veldt, Carl N. Kraus
Published in: Frontiers in Chemistry, Issue 6, 2018, ISSN 2296-2646
Publisher: Frontiers
DOI: 10.3389/fchem.2018.00309

Carbapenemase-producing Pseudomonas aeruginosa in Spain: interregional dissemination of the high-risk clones ST175 and ST244 carrying blaVIM-2, blaVIM-1, blaIMP-8, blaVIM-20 and blaKPC-2

Author(s): María PÉREZ-VÁZQUEZ, Pedro J. SOLA-CAMPOY, Ángela María ZURITA, Alicia ÁVILA, Frederic GÓMEZ-BERTOMEU, Sonia SOLÍS, Luis LÓPEZ-URRUTIA, Eva Mª GÓNZALEZ-BARBERÁ, Emilia CERCENADO, Verónica BAUTISTA, Noelia LARA, Belén ARACIL, Antonio OLIVER, José CAMPOS, Jesús OTEO-IGLESIAS
Published in: International Journal of Antimicrobial Agents, Issue 56/1, 2020, Page(s) 106026, ISSN 0924-8579
Publisher: Elsevier BV
DOI: 10.1016/j.ijantimicag.2020.106026

Antimicrobial Consumption and Resistance in a Tertiary Care Hospital in Jordan: Results of an Internet-Based Global Point Prevalence Survey

Author(s): Khawla Abu Hammour, Esraa AL-Heyari, Aya Allan, Ann Versporten, Herman Goossens, Ghayda’ Abu Hammour, Qusai Manaseer
Published in: Antibiotics, Issue 9/9, 2020, Page(s) 598, ISSN 2079-6382
Publisher: Antibiotics
DOI: 10.3390/antibiotics9090598

A Lateral Flow Immunoassay for the Rapid Identification of CTX-M-Producing Enterobacterales from Culture Plates and Positive Blood Cultures

Author(s): Sandrine Bernabeu, Kayaththiry Caroline Ratnam, Hervé Boutal, Camille Gonzalez, Anaïs Vogel, Karine Devilliers, Marc Plaisance, Saoussen Oueslati, Surbhi Malhotra-Kumar, Laurent Dortet, Nicolas Fortineau, Stéphanie Simon, Hervé Volland, Thierry Naas
Published in: Diagnostics, Issue 10/10, 2020, Page(s) 764, ISSN 2075-4418
Publisher: MDPI
DOI: 10.3390/diagnostics10100764

Comparison of GeneXpert MRSA/SA ETA assay with semi-quantitative and quantitative cultures and nuc gene-based qPCR for detection of Staphylococcus aureus in endotracheal aspirate samples

Author(s): Jasmine Coppens, Liesbet Van Heirstraeten, Alexey Ruzin, Li Yu, Leen Timbermont, Christine Lammens, Veerle Matheeussen, Michael McCarthy, Philippe Jorens, Margareta Ieven, Samir Kumar-Singh, Herman Goossens, Surbhi Malhotra-Kumar
Published in: Antimicrobial Resistance & Infection Control, Issue 8/1, 2019, ISSN 2047-2994
Publisher: Scimago Journal
DOI: 10.1186/s13756-018-0460-8

Proposal for assignment of allele numbers for mobile colistin resistance (mcr) genes

Author(s): Sally R Partridge, Vincenzo Di Pilato, Yohei Doi, Michael Feldgarden, Daniel H Haft, William Klimke, Samir Kumar-Singh, Jian-Hua Liu, Surbhi Malhotra-Kumar, Arjun Prasad, Gian Maria Rossolini, Stefan Schwarz, Jianzhong Shen, Timothy Walsh, Yang Wang, Basil Britto Xavier
Published in: Journal of Antimicrobial Chemotherapy, Issue 73/10, 2018, Page(s) 2625-2630, ISSN 0305-7453
Publisher: Oxford University Press
DOI: 10.1093/jac/dky262

Middle Ear Microbiome in Otitis Media with Effusion, the Role of Alloiococcus Otitidis

Author(s): Dora Szabo, Szilvia Fekete, Janos Juhasz, Nora Makra, Zsuzsanna A. Dunai, Katalin Kristóf, Eszter Ostorhazi, Laszlo Tamas, Nora Kecskemeti, Gabor Polony
Published in: Heliyon, 2024, ISSN 2405-8440
Publisher: Cell press
DOI: 10.2139/ssrn.4693874

Complex Infection-Control Measures with Disinfectant Switch Help the Successful Early Control of Carbapenem-Resistant Acinetobacter baumannii Outbreak in Intensive Care Unit

Author(s): Jozsef Kelemen, Marton Sztermen, Eva Krisztina Dakos, Jozsef Budai, Jozsef Katona, Zsuzsanna Szekeressy, Laszlo Sipos, Zoltan Papp, Balazs Stercz, Zsuzsanna A. Dunai, Bela Kocsis, Janos Juhasz, Fruzsina Michelisz, Zsuzsanna Daku, Judit Domokos, Dora Szabo, Lorand Eross
Published in: Antibiotics, Issue 13, 2024, Page(s) 869, ISSN 2079-6382
Publisher: antibitoics
DOI: 10.3390/antibiotics13090869

Influence of Substitutions in the Binding Motif of Proline-Rich Antimicrobial Peptide ARV-1502 on 70S Ribosome Binding and Antimicrobial Activity

Author(s): Brakel A, Krizsan A, Itzenga R, Kraus CN, Otvos L Jr, Hoffmann R.
Published in: Int. J. Mol. Sci., 2022, ISSN 1422-0067
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms23063150

First Report of Campylobacter jejuni Strains Belonging to ST-21 Clonal Complex Isolated from Human, Poultry and Wild Birds in Croatia: Antimicrobial Resistance and Genetic Distance

Author(s): Šoprek S, Ujević J, Kompes G, Jurinović L, Tambić Andrašević A.
Published in: Microorganisms, 2023, ISSN 2076-2607
Publisher: MDPI
DOI: 10.3390/microorganisms11081884

The Association between Resistance and Virulence of Klebsiella pneumoniae in High-Risk Clonal Lineages ST86 and ST101

Author(s): Irina Pristas, Josip Ujevic, Kristian Bodulić, Natasa Andrijasevic, Branka Bedenic, Marina Payerl-Pal, Edita Susic, Karolina Dobrovic, Sien De Koster, Surbhi Malhotra-Kumar, Arjana Tambic Andrasevic
Published in: Microorganisms, Issue 12, 2024, Page(s) 1997, ISSN 2076-2607
Publisher: microorganisms
DOI: 10.3390/microorganisms12101997

Pseudomonas aeruginosa antimicrobial susceptibility profiles, resistance mechanisms and international clonal lineages: update from ESGARS-ESCMID/ISARPAE Group

Author(s): Antonio Oliver, Estrella Rojo-Molinero, Jorge Arca-Suarez, Yeşim Beşli, Pierre Bogaerts, Rafael Cantón, Cansu Cimen, Peter D. Croughs, Olivier Denis, Christian G. Giske, Tíscar Graells, Te-Din Daniel Huang, Bogdan I. Iorga, Onur Karatuna, Béla Kocsis, Andreas Kronenberg, Carla López-Causapé, Surbhi Malhotra-Kumar, Luis Martínez Martínez, Annarita Mazzariol, Sylvain Meyer, Thierry Naas, Da
Published in: Clinical Microbiology and Infection, 2024, ISSN 1198-743X
Publisher: Blackwell Publishing Inc.
DOI: 10.1016/j.cmi.2023.12.026

The Roles of a Multidrug-Resistant Klebsiella pneumoniae High-Risk Clone and Its Resistance Plasmids on the Gastrointestinal Colonization and Host-Defense Effectors in the Gut

Author(s): Balazs Stercz, Judit Domokos, Zsuzsanna A. Dunai, Nora Makra, Janos Juhasz, Eszter Ostorhazi, Bela Kocsis, Dora Szabo
Published in: Antibiotics, Issue 13, 2024, Page(s) 698, ISSN 2079-6382
Publisher: antibiotics
DOI: 10.3390/antibiotics13080698

Investigation of Delafloxacin Resistance in Multidrug-Resistant Escherichia coli Strains and the Detection of E. coli ST43 International High-Risk Clone

Author(s): Gulyás, D.; Kamotsay, K.; Szabó, D.; Kocsis, B.
Published in: Microorganisms, 2023, ISSN 2076-2607
Publisher: MDPI
DOI: 10.3390/microorganisms11061602

Specific nasopharyngeal Corynebacterium strains serve as gatekeepers against SARS-CoV-2 infection

Author(s): Szabo D, Ostorhazi E, Stercz B, Makra N, Penzes K, Kristof K, Antal I, Rethelyi JM, Zsigmond RI, Birtalan E, Merkely B, Tamas L
Published in: GeroScience, 2023, ISSN 2509-2723
Publisher: AGE
DOI: 10.1007/s11357-023-00850-1

Emergence and Dissemination of Extraintestinal Pathogenic High-Risk International Clones of Escherichia coli

Author(s): Kocsis B, Gulyás D, Szabó D.
Published in: Life, 2022, ISSN 2075-1729
Publisher: MDPI
DOI: 10.3390/life12122077

Susceptibility profiles and resistance genomics of Pseudomonas aeruginosa isolates from European ICUs participating in the ASPIRE-ICU trial

Author(s): Torrens G, van der Schalk TE, Cortes-Lara S, Timbermont L, Del Barrio-Tofiño E, Xavier BB, Zamorano L, Lammens C, Ali O, Ruzin A, Goossens H, Kumar-Singh S, Kluytmans J, Paling F, MacLean RC, Köhler T, López-Causapé C, Malhotra-Kumar S, Oliver A, ASPIRE-ICU study team
Published in: J Antimicrob Chemother, 2022, ISSN 1460-2091
Publisher: Oxford University Press
DOI: 10.1093/jac/dkac122

Searching for OpenAIRE data...

Deliverables

Publications

Share this page Share this page on social networks

Download Download the content of the page