ROles of ePitranscriptomic in diseasES

Project Information

ROPES

Grant agreement ID: 956810

DOI

10.3030/956810

Project closed

EC signature date 8 September 2020

Start date 1 December 2020

End date 31 May 2025

Funded under

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Total cost

€ 3 095 829,00

EU contribution

€ 3 095 829,00

Coordinated by

UNIVERSITA DEGLI STUDI DI TRENTO
Italy

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Documents, reports (6)

First report on ROPES Training School
First report on ROPES Retreat

Report on ROPES Retreat

ESRs' Career Development Plans

ESRs Career Development Plans

Recruitment of ESR fellows
Dissemination, Communication and exploitation plan

Dissemination Communication and exploitation plan

ROPES Kick-off meeting and report

ROPES Kickoff meeting and report

Websites, patent fillings, videos etc. (1)

ROPES Website

Publications

Peer reviewed articles (8)

Small-Molecule Ebselen Binds to YTHDF Proteins Interfering with the Recognition of <i>N</i>⁶-Methyladenosine-Modified RNAs

Author(s): Mariachiara Micaelli; Andrea Dalle Vedove; Linda Cerofolini; Jacopo Vigna; Denise Sighel; Sara Zaccara; Isabelle Bonomo; Georgios Poulentzas; Emanuele Filiberto Rosatti; Giulia Cazzanelli; Laura Alunno; Romina Belli; Daniele Peroni; Erik Dassi; Shino Murakami; Samie R. Jaffrey; Marco Fragai; Ines Mancini; Graziano Lolli; Alessandro Quattrone; Alessandro Provenzani
Published in: ACS Pharmacology & Translational Science, Issue 1, 2022, ISSN 2575-9108
Publisher: ACS publications
DOI: 10.1021/acsptsci.2c00008

Charting the epitranscriptomic landscape across RNA biotypes using native RNA nanopore sequencing

Author(s): Gregor Diensthuber, Eva Maria Novoa
Published in: Molecular Cell, Issue 85, 2025, Page(s) 276-289, ISSN 1097-2765
Publisher: Cell Press
DOI: 10.1016/j.molcel.2024.12.014

MODOMICS: a database of RNA modification pathways. 2021 update

Author(s): Pietro Boccaletto; Filip Stefaniak; Angana Ray; Andrea Cappannini; Sunandan Mukherjee; Elżbieta Purta; Małgorzata Kurkowska; Niloofar Shirvanizadeh; Eliana Destefanis; Paula Groza; Gülben Avşar; Antonia Romitelli; Pınar Pir; Erik Dassi; Silvestro G Conticello; Francesca Aguilo; Janusz M Bujnicki
Published in: Nucleic Acids Research, Issue 1, 2021, ISSN 1362-4962
Publisher: Oxford Academics
DOI: 10.1093/nar/gkab1083

NACDDB: Nucleic Acid Circular Dichroism Database

Author(s): Andrea Cappannini; Kevin Mosca; Sunandan Mukherjee; S Naeim Moafinejad; Richard R Sinden; Veronique Arluison; Janusz Bujnicki; Frank Wien
Published in: Crossref, Issue 1, 2022, ISSN 1362-4962
Publisher: Oxford University Press
DOI: 10.1093/nar/gkac829

ADAR2 enzymes: efficient site-specific RNA editors withgene therapy aspirations

Author(s): KHADIJA HAJJI, JIŘ Í SEDMÍK, ANNA CHERIAN, DAMIANO AMORUSO, LIAM P. KEEGAN, and MARY A. O’CONNELL
Published in: Rnajournal, 2022, ISSN 1469-9001
Publisher: Cold Spring Harbor
DOI: 10.1261/rna.079266.122

Nano3P-seq: transcriptome-wide analysis of gene expression and tail dynamics using end-capture nanopore cDNA sequencing

Author(s): Oguzhan Begik , Gregor Diensthuber, Huanle Liu .Anna Delgado-Tejedor, Cassandra Kontur, Adnan Muhammad Niazi, Eivind Valen, Antonio J. Giraldez,Jean-Denis Beaudoin ,John S. Mattick , Eva Maria Novoa 
Published in: Nature Methods (Nat Methods), 2022, ISSN 1548-7105
Publisher: Springer Nature
DOI: 10.1038/s41592-022-01714-w

Rapid and accurate demultiplexing of direct RNA nanopore sequencing data with SeqTagger

Author(s): Leszek P. Pryszcz, Gregor Diensthuber, Laia Llovera, Rebeca Medina, Anna Delgado-Tejedor, Luca Cozzuto, Julia Ponomarenko, Eva Maria Novoa
Published in: Genome Research, Issue 35, 2025, Page(s) 956-966, ISSN 1088-9051
Publisher: Cold Spring Harbor Laboratory Press
DOI: 10.1101/gr.279290.124

METTL3 as a master regulator of translation in cancer: mechanisms and implications

Author(s): Margalida Esteva-Socias, Francesca Aguilo
Published in: NAR Cancer, Issue 6, 2024, ISSN 2632-8674
Publisher: Oxford University Press (OUP)
DOI: 10.1093/narcan/zcae009

Conference proceedings (1)

DEGRONOPEDIA - a web server for proteome-wide inspection of degrons

Author(s): Natalia A. Szulc, Filip Stefaniak, Małgorzata Piechota, Andrea Cappannini, Janusz M. Bujnicki, Wojciech Pokrzywa
Published in: 2024
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2022.05.19.492622