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CORDIS - EU research results
CORDIS

A European-wide foundation to accelerate Data-driven Cancer Research

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Synthetic cohort status (opens in new window)

Descriptions, documentation, and links to the synthetic cohorts generated by the project.

Policy Brief (opens in new window)

This Policy Brief should include specific information about the project results and outcomes and the links with the other Research Infrastructures and the European Open Science Cloud -EOSC family, including links to any relevant policy documents and deliverables. The information gathered from the projects through these Policy briefs will inform future policy and programme developments by EU policymakers.To be delivered together with the First Periodic Report.

Summary report on use-cases (opens in new window)

Final report on use-cases 1-5 describing the results, lessons learned, and recommendations for future projects in the Cancer Mission

European landscape and stakeholder engagement report (opens in new window)

Report on engagement with relevant initiatives and stakeholders

Report on sustainability plans (opens in new window)

Sustainability plans for project outputs

Publication of live Outreach and Communications Strategy (opens in new window)

Report outlining the project strategy on communication to key stakeholders and the wider public

A guidance document for the EOSC4Cancer learning pathways (opens in new window)

A document outlining learning pathways designed under EOSC4Cancer and connecting them to the identified EOSC roles and skills

Policy Brief Update (opens in new window)

Update -- This Policy Brief should include specific information about the project results and outcomes and the links with the other Research Infrastructures and the European Open Science Cloud -EOSC family, including links to any relevant policy documents and deliverables. The information gathered from the projects through these Policy briefs will inform future policy and programme developments by EU policymakers.To be delivered together with the Second and Final Periodic Report.

Roadmap for EOSC support to a European Cancer Data Space (opens in new window)

Long-term EOSC4Cancer service roadmap.

SOPs for minimal clinical, image and omics data exchange (opens in new window)

A set of SOPs for minimal data exchange taking into account how cancer-related resources are stored, coded and made accessible in key resources identified via WP1.1

Survey-based report determining annotation and harmonization needs (opens in new window)

Field survey report, minimum required data structure determined (Benchmark analysis determining annotation and harmonization needs across colorectal cancer research and clinical community).

Project Data Management Plan (opens in new window)

Project data management plan following EC requirements and recommendations.

Courses portfolio, linked through the RDMkit Cancer View (opens in new window)

A document outlining the key learning pathways defined under Task 5.2, and linked through the RDMkit Cancer View portal

Project Data Management Plan Update (opens in new window)

Project data management plan – Final report

Virtual Research Environment interoperability (opens in new window)

Demonstrator of portals and analysis workflows interoperability.

Data access interoperability (opens in new window)

A demonstrator covering the status of DUO and AAI interoperability across the data resources.

Reference Beacon implementation for EOSC4Cancer (opens in new window)

Dedicated beacon instances are lighted for the relevant data sources needed by the use-cases. Report and demo

Integrated analysis of multiple data types (opens in new window)

Portable cBioPortal implementation capable of integration of multiple federated data types

Data resources map (opens in new window)

Living map of data resources including high level descriptors, accessprocedures and interfaces, and data use requirements.

Molecular Tumour Board Portal interoperability (opens in new window)

Demonstrator of MTBP capabilities to integrate novel data types relevant for patient cohort

First content of the RDMkit Cancer View (opens in new window)

An active portal to be viewed (Have a first outline of the RDMkit Cancer View page).

Initial resource directory map (opens in new window)

First catalogue instance ‘live’, including documentation, and resource links for implementations of standards

Final release of the RDMkit Cancer View (opens in new window)

An active portal to be viewed (Final release of the RDMkit Cancer View page).

Publications

Lessons Learned From European Health Data Projects With Cancer Use Cases: Implementation of Health Standards and Internet of Things Semantic Interoperability (opens in new window)

Author(s): Amelie Gyrard, Somayeh Abedian, Philip Gribbon, George Manias, Rick van Nuland, Kurt Zatloukal, Irina Emilia Nicolae, Gabriel Danciu, Septimiu Nechifor, Luis Marti-Bonmati, Pedro Mallol, Stefano Dalmiani, Serge Autexier, Mario Jendrossek, Ioannis Avramidis, Eva Garcia Alvarez, Petr Holub, Ignacio Blanquer, Anna Boden, Rada Hussein
Published in: Journal of Medical Internet Research, Issue 27, 2025, ISSN 1438-8871
Publisher: JMIR Publications Inc.
DOI: 10.2196/66273

Roadmap for a European cancer data management and precision medicine infrastructure (opens in new window)

Author(s): Macha Nikolski, Eivind Hovig, Fatima Al-Shahrour, Niklas Blomberg, Serena Scollen, Alfonso Valencia, Gary Saunders
Published in: Nature Cancer, Issue 5, 2024, ISSN 2662-1347
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/S43018-023-00717-6

Sharing data as machine-actionable objects using RO-Crate, Bioschemas and Signposting (opens in new window)

Author(s): Stian Soiland-Reyes; Simone Leo; Leyla Jael Castro; Peter Sefton; Carole Goble
Published in: F1000, 2023
Publisher: ELIXIR
DOI: 10.7490/f1000research.1119431.1

Structure (opens in new window)

Author(s): Schwalbe, Harald; Audergon, Pauline; Haley, Natalie; Amaro, Claudia Alen; Agirre, Jon; Baldus, Marc; Banci, Lucia; Baumeister, Wolfgang; Blackledge, Martin; Carazo, Jose Maria; Carugo, Kristina Djinovic; Celie, Patrick; Felli, Isabella; Hart, Darren J.; Hauß, Thomas; Lehtiö, Lari; Lindorff-Larsen, Kresten; Márquez, José; Matagne, André; Pierattelli, Roberta; Rosato, Antonio; Sobott, Frank; Sreeramulu, Sridhar; Steyaert, Jan; Sussman, Joel L.; Trantirek, Lukas; Weiss, Manfred S.; Wilmanns, Matthias
Published in: Structure, 2024, ISSN 0969-2126
Publisher: Cell Press
DOI: 10.1016/J.STR.2024.08.014

FAIR-IMPACT synergies with EOSC4Cancer (opens in new window)

Author(s): Stian Soiland-Reyes; Carole Goble; Raquel Villodres Toledo; Romina Royo; Salvador Capella-Gutierrez
Published in: EOSC4CANCER, 2022
Publisher: Zenodo
DOI: 10.5281/zenodo.6771194

UNCAN.eu: Toward a European Federated Cancer Research Data Hub (opens in new window)

Author(s): Boutros, Michael; Baumann, Michael; Bigas, Anna; Chaabane, Linda; Guérin, Julien; Habermann, Jens K.; Habermann, Jens K.; JOBARD, Aurélien; PELICCI, PIER GIUSEPPE; Stegle, Oliver; Tonon, Giovanni; valencia, alfonso; Winkler, Eva; BLANC, Patricia; De Maria, Ruggero; Medema, Rene H.; Nagy, Péter; Tabernero, Josep; Solary, Eric
Published in: Cancer Discovery, 2024, ISSN 2159-8290
Publisher: Cancer Discovery
DOI: 10.1158/2159-8290.CD-23-1111

OpenVariant: a toolkit to parse and operate multiple input file formats (opens in new window)

Author(s): David Martínez-Millán, Federica Brando, Miguel L. Grau, Mònica Sánchez-Guixé, Carlos López-Elorduy, Iker Reyes-Salazar, Jordi Deu-Pons, Núria López-Bigas, Abel González-Pérez
Published in: Bioinformatics, Issue 40, 2024, ISSN 1367-4811
Publisher: Oxford University Press (OUP)
DOI: 10.1093/BIOINFORMATICS/BTAE714

Identification of Clonal Hematopoiesis Driver Mutations through In Silico Saturation Mutagenesis (opens in new window)

Author(s): Santiago Demajo; Joan E. Ramis-Zaldivar; Ferran Muiños; Miguel L. Grau; Maria Andrianova; Núria López-Bigas; Abel González-Pérez
Published in: Cancer Discovery, 2023, ISSN 1538-7445
Publisher: American Association for Cancer Research
DOI: 10.1101/2023.12.13.23299893

UNCAN.eu: Toward a European Federated Cancer Research Data Hub (opens in new window)

Author(s): Michael Boutros, Michael Baumann, Anna Bigas, Linda Chaabane, Julien Guérin, Jens K. Habermann, Aurélien Jobard, Pier Giuseppe Pelicci, Oliver Stegle, Giovanni Tonon, Alfonso Valencia, Eva C. Winkler, Patricia Blanc, Ruggero De Maria, Rene H. Medema, Peter Nagy, Josep Tabernero, Eric Solary
Published in: Cancer Discovery, Issue 14, 2024, ISSN 2159-8274
Publisher: American Association for Cancer Research (AACR)
DOI: 10.1158/2159-8290.CD-23-1111

TrialMatchAI: An End-to-End AI-powered Clinical Trial Recommendation System to Streamline Patient-to-Trial Matching (opens in new window)

Author(s): Majd Abdallah, Sigve Nakken, Mariska Bierkens, Johanna Galvis, Alexis Groppi, Slim Karkar, Lana Meiqari, Maria Alexandra Rujano, Steve Canham, Rodrigo Dienstmann, Remond Fijneman, Eivind Hovig, Gerrit Meijer, Macha Nikolski
Published in: arxiv and submitted to Nature Communications, 2025, ISSN 2331-8422
Publisher: Arxiv
DOI: 10.48550/ARXIV.2505.08508

Kickoff meeting - EOSC4Cancer Network of key cancer data support professionals (opens in new window)

Author(s): Celia W.G. van Gelder
Published in: EOSC4CANCER, 2023
Publisher: Zenodo
DOI: 10.5281/zenodo.8328995

Life Science Competence Centres: Open by Design (opens in new window)

Author(s): David, Romain; Liaskos, Nektarios; Rybina, Arina; Arvanitidis, Christos; Bage, Anne-Sophie; Carvajal-Vallejos, Patricia K.; Das, Sudeep; De Pascalis, Francesca; Dörr, Dorothea; Exter, Katrina; Holub, Petr; Gurwitz, Kim Tamara; Liberante, Fabio; Lieutaud, Philippe; Lister, Allyson; Lopez, Joaquin; Madon, Bénédicte; Massimi, Marzia; Matteoni, Rafaele; Mîrza, Maria; Morgan, Sarah; Oezdemir, Bugra; Panagiotopoulou, Maria; Pavloudi, Christina; P. Melo, Ana M.; Sansone, Susanna-Assunta; Schwalbe, Harald; Serrano-Solano, Beatriz; Sorzano, Carlos Oscar; Urbinati, Emilio; Tang, Jing; Tedds, Jonathan; Saunders, Gary; Ewbank, Jonathan
Published in: 2025
Publisher: zenodo
DOI: 10.5281/ZENODO.15798751

EOSC4Cancer: Federated discovery for secondary use of cancer registry data

Author(s): Teresa García Lezana, Jordi Rambla, Jan Trallero, Rafael Marcos-Gragera, EU EOSC4Cancer Consortium
Published in: 2023
Publisher: ENCR Secretariat

EOSC4Cancer Project Presentation (opens in new window)

Author(s): Capella-Gutierrez, Salvador; Valencia, Alfonso; Villodres Toledo, Raquel; Royo, Romina
Published in: 2023
Publisher: Zenodo
DOI: 10.5281/ZENODO.8256508

D1.2 Data access interoperability (opens in new window)

Author(s): Sankar, Aravind; Keane, Thomas
Published in: 2025
Publisher: zenodo
DOI: 10.5281/ZENODO.15638952

D1.1 - Data Resources Map (opens in new window)

Author(s): Swertz, Morris; Been, Gerieke; Hijmans, Brenda
Published in: 2023
DOI: 10.5281/ZENODO.10837116

D4.2 - Summary report on use cases (opens in new window)

Author(s): Meijer, Gerrit; ambrosino, concetta; Carvalho, Beatriz; Hajduch, Marian; Fijneman, Remond; Bierkens, Mariska; Dienstmann, Rodrigo; Huijskens, Sophie; Boiten, Jan-Willem; tamborero, david; Bendova, Michaela; Navest, Robin
Published in: 2025
Publisher: Zenodo
DOI: 10.5281/ZENODO.15526959

TrialMatchAI: An End-to-End AI-powered Clinical Trial Recommendation System to Streamline Patient-to-Trial Matching (opens in new window)

Author(s): Abdallah, Majd; Nakken, Sigve; Bierkens, Mariska; Galvis, Johanna; Groppi, Alexis; Karkar, Slim; Meiqari, Lana; Rujano, Maria Alexandra; Canham, Steve; Dienstmann, Rodrigo; Fijneman, Remond; Hovig, Eivind; Meijer, Gerrit; Nikolski, Macha
Published in: 2025
Publisher: arxiv
DOI: 10.48550/ARXIV.2505.08508

D2.2 - Analytical methods for data extraction, processing and sharing using biomedical images (opens in new window)

Author(s): Navest, Robin; Chèneby, Jeanne; Achterberg, Hakim; Gammaraccio, Francesco; Longo, Dario
Published in: 2025
Publisher: zenodo
DOI: 10.5281/ZENODO.15704479

cBioPortal Presentation Slides (opens in new window)

Author(s): EOSC4Cancer
Published in: EOSC4CANCER, 2023
Publisher: Zenodo
DOI: 10.5281/zenodo.8163342

cBioPortal image integration manual (opens in new window)

Author(s): Navest, Robin; Birhanu, Mahlet; Horak, Jirka; Longo, Dario
Published in: 2025
DOI: 10.5281/ZENODO.14900295

D2.3 Survey-based report determining annotation and harmonization needs (opens in new window)

Author(s): Hajduch, Marian; Sromova, Katerina; Capella-Gutierrez, Salvador; Royo, Romina
Published in: 2023
Publisher: Zenodo
DOI: 10.5281/ZENODO.10067295

D5.1 - A guidance document for the EOSC4Cancer learning pathway (opens in new window)

Author(s): Psomopoulos, Fotis; Al-Shahrour, Fátima; van Gelder, Celia; Morgan, Sarah; Andrabi, Munazah; Majcen, Kurt; Schoots, Fieke
Published in: 2023
DOI: 10.5281/ZENODO.10200523

D7.6 - Updated EOSC Policy Brief (opens in new window)

Author(s): EOSC4Cancer Consortium
Published in: 2025
Publisher: zenodo
DOI: 10.5281/ZENODO.16572770

Making EOSC Research Objects FAIR with RO-Crate: A common metadata overlay for EOSC repositories (opens in new window)

Author(s): Justin Clark-Casey; Stian Soiland-Reyes
Published in: ELIXIR, 2022
Publisher: Zenodo
DOI: 10.5281/zenodo.7323301

D6.1 Publication of live Outreach and Communications Strategy (opens in new window)

Author(s): Schulz, Carola; Hanafi, Mouaz; Firdous, Sabah; Stroetmann, Veli
Published in: 2023
DOI: 10.5281/ZENODO.10067313

D1.4 - Synthetic Cohort Status (opens in new window)

Author(s): Capella, Salvador; Aguiló, Sergi; Vázquez, Miguel; Labarga, Alberto; Royo, Romina
Published in: 2024
Publisher: Zenodo
DOI: 10.5281/ZENODO.10847696

cBioPortal Presentation Slides (opens in new window)

Author(s): EOSC4Cancer
Published in: EOSC4CANCER, 2023
Publisher: Zenodo
DOI: 10.5281/ZENODO.8163342

Establishing the EOSC4Cancer Network of Experts (opens in new window)

Author(s): Psomopoulos, Fotis; Al-Shahrour, Fátima; van Gelder, Celia
Published in: 2023
Publisher: Zenodo
DOI: 10.5281/ZENODO.8073708

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