Repurposing small RNA from ciliates for genome editing: single-molecule study

Project Information

MIGHTY_RNA

Grant agreement ID: 819299

DOI

10.3030/819299

Project closed

EC signature date 18 December 2018

Start date 1 May 2019

End date 30 April 2024

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 1 792 850,00

EU contribution

€ 1 792 850,00

Coordinated by

TECHNISCHE UNIVERSITEIT DELFT
Netherlands

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (8)

the road to next-generation single-molecule biophysics

Author(s): Severins, I.W.H.; Joo, C.; Noort, S.J.T. van
Published in: Molecular Cell, Issue 4, 2022, ISSN 1097-2765
Publisher: Cell Press
DOI: 10.1016/j.molcel.2022.04.024

RNA-guided RNA silencing by an Asgard archaeal Argonaute

Author(s): Carolien Bastiaanssen, Pilar Bobadilla Ugarte, Kijun Kim, Giada Finocchio, Yanlei Feng, Todd A. Anzelon, Stephan Köstlbacher, Daniel Tamarit, Thijs J. G. Ettema, Martin Jinek, Ian J. MacRae, Chirlmin Joo, Daan C. Swarts & Fabai Wu
Published in: Nature Communications, Issue 15, 2024, Page(s) 5499, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-024-49452-1

mRNA structural dynamics shape Argonaute-target interactions

Author(s): Suzan Ruijtenberg, Stijn Sonneveld, Tao Ju Cui, Ive Logister, Dion de Steenwinkel, Yao Xiao, Ian J. MacRae, Chirlmin Joo, Marvin E. Tanenbaum
Published in: Nature Structural & Molecular Biology, Issue 27/9, 2020, Page(s) 790-801, ISSN 1545-9993
Publisher: Nature Publishing Group
DOI: 10.1038/s41594-020-0461-1

High-Speed Super-Resolution Imaging Using Protein-Assisted DNA-PAINT

Author(s): Mike Filius, Tao Ju Cui, Adithya N. Ananth, Margreet W. Docter, Jorrit W. Hegge, John van der Oost, Chirlmin Joo
Published in: Nano Letters, Issue 20/4, 2020, Page(s) 2264-2270, ISSN 1530-6984
Publisher: American Chemical Society
DOI: 10.1021/acs.nanolett.9b04277

FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices

Author(s): Lerner, Eitan; Barth, Anders; Hendrix, Jelle; Ambrose, Benjamin; Birkedal, Victoria; Blanchard, Scott C.; Börner, Richard; Chung, Hoi Sung; Cordes, Thorben; Craggs, Timothy D.; Deniz, Ashok A.; Diao, Jiajia; Fei, Jingyi; Gonzalez, Ruben L.; Gopich, Irina V.; Ha, Taekjip; Hanke, Christian A.; Haran, Gilad; Hatzakis, Nikos S.; Hohng, Sungchul; Hong, Seok Cheol; Hugel, Thorsten; Ingargiola, Antonino
Published in: eLife, Issue 2, 2021, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.7554/elife.60416

Argonaute bypasses cellular obstacles without hindrance during target search

Author(s): Tao Ju Cui, Misha Klein, Jorrit W. Hegge, Stanley D. Chandradoss, John van der Oost, Martin Depken, Chirlmin Joo
Published in: Nature Communications, Issue 10/1, 2019, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-019-12415-y

Targeting G-quadruplex Forming Sequences with Cas9

Author(s): Hamza Balci; Hamza Balci; Viktorija Globyte; Chirlmin Joo
Published in: ACS Chemical Biology, Issue 2, 2021, ISSN 1554-8929
Publisher: American Chemical Society
DOI: 10.1101/2020.09.19.304816

Small RNA-directed DNA elimination: the molecular mechanism and its potential for genome editing.

Author(s): C.K.J.M.L. Bastiaanssen; Chirlmin Joo
Published in: RNA Biology, Issue 2, 2021, ISSN 1547-6286
Publisher: Landes Bioscience
DOI: 10.1080/15476286.2021.1885208