Three-dimensional holo’omic landscapes to unveil host-microbiota interactions shaping animal production

Project Information

3D-omics

Grant agreement ID: 101000309

DOI

10.3030/101000309

Project closed

EC signature date 10 May 2021

Start date 1 September 2021

End date 31 December 2025

Funded under

• SOCIETAL CHALLENGES - Food security, sustainable agriculture and forestry, marine, maritime and inland water research, and the bioeconomy

Total cost

€ 10 073 540,01

EU contribution

€ 9 994 415,00

Coordinated by

KOBENHAVNS UNIVERSITET
Denmark

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Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Other (2)

3D'omics outreach videos

3Domics outreach videos

www.3domics.eu website

www3domicseu website

Publications

Peer reviewed articles (4)

Predicting microbial interactions with approaches based on flux balance analysis: an evaluation

Author(s): Clémence Joseph, Haris Zafeiropoulos, Kristel Bernaerts, Karoline Faust
Published in: BMC Bioinformatics, Issue 25, 2024, ISSN 1471-2105
Publisher: BioMed Central
DOI: 10.1186/s12859-024-05651-7

microbetag: simplifying microbial network interpretation through annotation, enrichment tests, and metabolic complementarity analysis

Author(s): Haris Zafeiropoulos, Ermis Ioannis Michail Delopoulos, Andi Erega, Aline Schneider, Annelies Geirnaert, John Morris, Karoline Faust
Published in: Genome Biology, Issue 26, 2025, Page(s) 1-34, ISSN 1474-760X
Publisher: Springer Science and Business Media LLC
DOI: 10.1186/s13059-025-03769-2

Integrating host and microbiome biology using holo-omics

Author(s): Carl M Kobel, Jenny Merkesvik, Idun Maria Tokvam Burgos, Wanxin Lai, Ove Øyås, Phillip B Pope, Torgeir R Hvidsten, Velma T E Aho
Published in: Molecular Omics, Issue 20, 2026, Page(s) 438-452, ISSN 2515-4184
Publisher: Oxford University Press (OUP)
DOI: 10.1039/d4mo00017j

Differential effects of synbiotic delivery route (feed, water, combined) in broilers challenged with Salmonella Infantis

Author(s): Victoria Drauch, Mahdi Ghanbari, Nicole Reisinger, Michaela Mohnl, Claudia Hess, Michael Hess
Published in: Poultry Science, Issue 104, 2025, Page(s) 104890, ISSN 0032-5791
Publisher: Poultry Science Association Inc.
DOI: 10.1016/j.psj.2025.104890