Ontology-driven and artificial intelligence-based repeated dose toxicity testing of chemicals for next generation risk assessment

CORDIS oferuje możliwość skorzystania z odnośników do publicznie dostępnych publikacji i rezultatów projektów realizowanych w ramach programów ramowych HORYZONT.

Odnośniki do rezultatów i publikacji związanych z poszczególnymi projektami 7PR, a także odnośniki do niektórych konkretnych kategorii wyników, takich jak zbiory danych i oprogramowanie, są dynamicznie pobierane z systemu OpenAIRE .

Rezultaty

Report on existing in vitro assays to detect MIEs and KEs in the qAOP networks on liver steatosis and cholestasis
Report on existing and novel in vitro assays to detect MIEs and KEs in the qAOP network on cognitive function defects
Report on existing in vitro assays to detect MIEs and KEs in the qAOP networks on tubular necrosis and crystallopathy
Report on the definition of and contact with target audiences

Project website

Computational model for neural tube closure defects

Publikacje

Computational Strategies for Assessing Adverse Outcome Pathways: Hepatic Steatosis as a Case Study

Autorzy: Rita Ortega-Vallbona, Martina Palomino-Schätzlein, Laia Tolosa, Emilio Benfenati, Gerhard F. Ecker, Rafael Gozalbes, Eva Serrano-Candelas
Opublikowane w: International Journal of Molecular Sciences, Numer 25, 2024, Strona(/y) 11154, ISSN 1422-0067
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms252011154

Safer chemicals using less animals: kick-off of the European ONTOX project

Autorzy: Mathieu Vinken, Emilio Benfenati, François Busquet, José Castell, Djork-Arné Clevert, Theo M. de Kok, Hubert Dirven, Ellen Fritsche, Liesbet Geris, Rafael Gozalbes, Thomas Hartung, Danyel Jennen, Ramiro Jover, Helena Kandarova, Nynke Kramer, Cyrille Krul, Thomas Luechtefeld, Rosalinde Masereeuw, Erwin Roggen, Stephan Schaller, Tamara Vanhaecke, Chihae Yang, Aldert H. Piersma
Opublikowane w: Toxicology, Numer 458, 2021, Strona(/y) 152846, ISSN 0300-483X
Wydawca: Elsevier BV
DOI: 10.1016/j.tox.2021.152846

Developmental neurotoxicity (DNT): A call for implementation of new approach methodologies for regulatory purposes: Summary of the 5th International Conference on DNT Testing

Autorzy: Ivana Celardo, Michael Aschner, Randolph S. Ashton, Kelly E. Carstens, Andrea Cediel-Ulloa, Eike Cöllen, Kevin M. Crofton, Susan J. Debad, Nadine Dreser, Suzanne Fitzpatrick, Ellen Fritsche, Sebastian Gutsfeld, Barry Hardy, Thomas Hartung, Ellen Hessel, Harm Heusinkveld, Helena T. Hogberg, Jui-Hua Hsieh, Yasunari Kanda, Gavin T. Knight, Thomas Knudsen, Katharina Koch, Eliska Kuchovska, Iris Manga
Opublikowane w: ALTEX, Numer 42, 2025, Strona(/y) 323-349, ISSN 1868-8551
Wydawca: ALTEX
DOI: 10.14573/altex.2503191

Unsupervised Representation Learning for Proteochemometric Modeling

Autorzy: Kim, Paul T., Robin Winter, and Djork-Arné Clevert
Opublikowane w: International Journal of Molecular Sciences, Numer 22/23, 2021, Strona(/y) 12882, ISSN 1422-0067
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms222312882

A computational dynamic systems model for in silico prediction of neural tube closure defects

Autorzy: Job H. Berkhout, James A. Glazier, Aldert H. Piersma, Julio M. Belmonte, Juliette Legler, Richard M. Spencer, Thomas B. Knudsen, Harm J. Heusinkveld
Opublikowane w: Current Research in Toxicology, Numer 8, 2025, Strona(/y) 100210, ISSN 2666-027X
Wydawca: Elsevier BV
DOI: 10.1016/j.crtox.2024.100210

Scientific validation of human Neurosphere Assays for Developmental Neurotoxicity evaluation

Autorzy: Koch K, Bartmann K, Hartmann J, Kapr J, Klose J, Kuchovská E, Pahl M, Schlüppmann K, Zühr E and Fritsche E
Opublikowane w: The Frontiers in toxicology/Section Neurotoxicology, Numer 4/816370, 2022, Strona(/y) 1-26, ISSN 2673-3080
Wydawca: Frontiers Media S.A.
DOI: 10.3389/ftox.2022.816370

Biology-inspired dynamic microphysiological system approaches to revolutionize basic research, healthcare and animal welfare

Autorzy: Uwe Marx, Sonja Beken, Zaozao Chen, E‑M Dehne, A Doherty, L Ewart, S C Fitzpatrick, L G Griffith, Z Gu, T Hartung, J Hickman, D E Ingber, S Ishida, J Jeong, M Leist, L Levin, D L Mendrick, G Pallocca, S Platz, M Raschke, L Smirnova, D A Tagle, M Trapecar, B W M van Balkom, J van den Eijnden‑van Raaij, A van der Meer,
Opublikowane w: ALTEX, Numer 42, 2025, Strona(/y) 204–223, ISSN 1868-596X
Wydawca: ALTEX Edition
DOI: 10.14573/altex.2410112

Mapping physiology: A systems biology approach for the development of alternative methods in toxicology

Autorzy: Bernard Staumont, Luiz Ladeira, Alessio Gamba, Harm J. Heusinkveld, Aldert Piersma, Ellen Fritsche, Rosalinde Masereeuw, Tamara Vanhaecke, Marc Teunis, Thomas H. Luechtefeld, Thomas Hartung, Ramiro Jover, Mathieu Vinken, Liesbet Geris
Opublikowane w: ALTEX, Numer Volume 42 (2), 2025, Strona(/y) 301–307, ISSN 1868-596X
Wydawca: ALTEX Edition
DOI: 10.14573/altex.2412241

The SCAHT Adverse Outcome Pathway (AOP)_HUB: A hands-on platform for information exchange, sharing, and developing AOPs

Autorzy: Emre Coerek, Eliska Kuchovska, Lidwina Gerner, Lihini Nilma, Dan Villeneuve and Ellen Fritsche
Opublikowane w: ALTEX, Numer 42, 2025, Strona(/y) 361-362, ISSN 1868-8551
Wydawca: ALTEX
DOI: 10.14573/altex.2502051

Optimization of an adverse outcome pathway network on chemical-induced cholestasis using an artificial intelligence-assisted data collection and confidence level quantification approach

Autorzy: Jonas van Ertvelde, Anouk Verhoeven, Amy Maerten, Axelle Cooreman, Bruna dos Santos Rodrigues, Julen Sanz-Serrano, Milos Mihajlovic, Ignacio Tripodi, Marc Teunis, Ramiro Jover, Thomas Luechtefeld, Tamara Vanhaecke, Jian Jiang, Mathieu Vinken
Opublikowane w: Journal of Biomedical Informatics, Numer Volume 145, September 2023, 2023, Strona(/y) 104465, ISSN 1532-0464
Wydawca: Academic Press
DOI: 10.1016/j.jbi.2023.104465

Natural language processing in toxicology: Delineating adverse outcome pathways and guiding the application of new approach methodologies

Autorzy: Marie Corradi, Alyanne de Haan, Bernard Staumont, Aldert Piersma, Liesbet Geris, Raymond Pieters, Cyrille Krul, Marc Teunis
Opublikowane w: Biosystems and Biomaterials, Numer 26665344, 2022, ISSN 2666-5344
Wydawca: Elsevier BV
DOI: 10.1016/j.bbiosy.2022.100061

In vitro test battery for testing molecular initiating events in chemical-induced cholestasis

Autorzy: Amy Maerten, Annika Drees, Jian Jiang, Julen Sanz-Serrano, Lindsey Devisscher, Mathieu Vinken
Opublikowane w: Toxicology, Numer 517, 2025, Strona(/y) 154210, ISSN 0300-483X
Wydawca: Elsevier BV
DOI: 10.1016/j.tox.2025.154210

ToxAIcology - The evolving role of artificial intelligence in advancing toxicology and modernizing regulatory science

Autorzy: Thomas Hartung
Opublikowane w: ALTEX, Numer 4/yr, 2023, Strona(/y) 559-570, ISSN 1868-8551
Wydawca: Springer Spektrum
DOI: 10.14573/altex.2309191

A call for a Human Exposome Project.

Autorzy: Thomas Hartung
Opublikowane w: ALTEX, Numer 4/yr, 2023, Strona(/y) 4–33, ISSN 1868-8551
Wydawca: Springer Spektrum
DOI: 10.14573/altex.2301061

Transcriptomic characterization of 2D and 3D human induced pluripotent stem cell-based in vitro models as New Approach Methodologies for developmental neurotoxicity testing

Autorzy: Malene Lislien, Eliska Kuchovska, Julia Kapr, Nur Duale, Jill Mari Andersen, Hubert Dirven, Oddvar Myhre, Ellen Fritsche, Katharina Koch, Marcin W. Wojewodzic
Opublikowane w: Toxicology, Numer 510, 2024, Strona(/y) 154000, ISSN 0300-483X
Wydawca: Elsevier BV
DOI: 10.1016/j.tox.2024.154000

Unlocking liver physiology: comprehensive pathway maps for mechanistic understanding

Autorzy: Luiz Ladeira, Anouk Verhoeven, Jonas van Ertvelde, Jian Jiang, Alessio Gamba, Julen Sanz-Serrano, Tamara Vanhaecke, Harm J. Heusinkveld, Ramiro Jover, Mathieu Vinken, Liesbet Geris, Bernard Staumont
Opublikowane w: Frontiers in Toxicology, Numer 7, 2025, Strona(/y) 1-10, ISSN 2673-3080
Wydawca: Frontiers Media SA
DOI: 10.3389/ftox.2025.1619651

Img2Mol – accurate SMILES recognition from molecular graphical depictions

Autorzy: Djork-Arné Clevert, Tuan Le, Robin Winter, Floriane Montanari
Opublikowane w: Chemical Science, Numer 12/42, 2021, Strona(/y) 14174-14181, ISSN 2041-6520
Wydawca: Royal Society of Chemistry
DOI: 10.1039/d1sc01839f

Report of the First ONTOX Stakeholder Network Meeting: Digging Under the Surface of ONTOX Together With the Stakeholders

Autorzy: Michael Diemar, Mathieu Vinken, Marc Teunis, Cyrille Krul, François Busquet, Julia Dominika Zajac, Helena Kandarova, Raffaella Corvi, Matteo Z. Russo, Anastasiia Kharina, Louise Bryndum, Michael Santillo, Denise Bloch, Olena Kucheryavenko, Demosthenes Panagiotakos, Vera Rogiers, Manon Beekhuijzen, Arianna Giusti, Abdulkarim Najjar, Carol CourageShow lessTorben Koenig, Susanne Kolle, Harrie Boonen
Opublikowane w: ATLA, Numer Jan, 2024, 2024, ISSN 0261-1929
Wydawca: Fund for the Replacement of Animals in Medical Experiments
DOI: 10.1177/02611929231225730

Novel clinical phenotypes, drug categorization, and outcome prediction in drug-induced cholestasis: Analysis of a database of 432 patients developed by literature review and machine learning support

Autorzy: Marta Moreno-Torres, Ernesto López-Pascual, Anna Rapisarda, Guillermo Quintás, Annika Drees, Inger-Lise Steffensen, Thomas Luechtefeld, Eva Serrano-Candelas, Marina Garcia de Lomana, Domenico Gadaleta, Hubert Dirven, Mathieu Vinken, Ramiro Jover
Opublikowane w: Biomedicine & Pharmacotherapy, Numer 174, 2024, Strona(/y) 116530, ISSN 0753-3322
Wydawca: Elsevier Masson
DOI: 10.1016/j.biopha.2024.116530

Monte Carlo Models for Sub-Chronic Repeated-Dose Toxicity: Systemic and Organ-Specific Toxicity

Autorzy: Gianluca Selvestrel, Giovanna J. Lavado, Alla P. Toropova, Andrey A. Toropov, Domenico Gadaleta, Marco Marzo, Diego Baderna and Emilio Benfenati
Opublikowane w: International Journal of Molecular Sciences, Numer 14220067, 2022, Strona(/y) 6615, ISSN 1422-0067
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms23126615

Mitochondria as the Target of Hepatotoxicity and Drug-Induced Liver Injury: Molecular Mechanisms and Detection Methods

Autorzy: Mihajlović M and Vinken M
Opublikowane w: International Journal of Molecular Sciences, Numer 23(6), 3315, 2022, Strona(/y) 1-37, ISSN 1422-0067
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms23063315

In Vitro Liver Toxicity Testing of Chemicals: A Pragmatic Approach

Autorzy: Andrés Tabernilla, Bruna dos Santos Rodrigues, Alanah Pieters, Anne Caufriez, Kaat Leroy, Raf Van Campenhout, Axelle Cooreman, Ana Rita Gomes, Emma Arnesdotter, Eva Gijbels, Mathieu Vinken
Opublikowane w: International Journal of Molecular Sciences, Numer 22/9, 2021, Strona(/y) 5038, ISSN 1422-0067
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms22095038

Accessible methods and tools to estimate chemical exposure in humans to support risk assessment: A systematic scoping review

Autorzy: Maria E. Kalyva, Gunn E. Vist, Michael Guy Diemar, Graciela López-Soop, T.J. Bozada, Thomas Luechtefeld, Erwin L. Roggen, Hubert Dirven, Mathieu Vinken, Trine Husøy
Opublikowane w: Environmental Pollution, Numer 352, 2024, Strona(/y) 124109, ISSN 0269-7491
Wydawca: Pergamon Press Ltd.
DOI: 10.1016/j.envpol.2024.124109

Unraveling the mechanisms underlying drug-induced cholestatic liver injury: identifying key genes using machine learning techniques on human on in vitro data sets.

Autorzy: Jian Jiang, Jonas van Ertvelde, Gökhan Ertaylan, Ralf Peeters, Danyel Jennen, Theo M. de Kok, Mathieu Vinken
Opublikowane w: Archives of Toxicology, Numer volume 91, 2023, 2023, Strona(/y) 2969-2981, ISSN 1432-0738
Wydawca: Springer
DOI: 10.1007/s00204-023-03583-4

Comprehensive benchmarking of computational tools for predicting toxicokinetic and physicochemical properties of chemicals

Autorzy: Domenico Gadaleta, Eva Serrano-Candelas, Rita Ortega-Vallbona, Erika Colombo, Marina Garcia de Lomana, Giada Biava, Pablo Aparicio-Sánchez, Alessandra Roncaglioni, Rafael Gozalbes, Emilio Benfenati
Opublikowane w: Journal of Cheminformatics, Numer 16, 2024, Strona(/y) 145, ISSN 1758-2946
Wydawca: Chemistry Central
DOI: 10.1186/s13321-024-00931-z

Acceptance criteria for new approach methods in toxicology and human health-relevant life science research – part I

Autorzy: Anna-Katharina Holzer
Opublikowane w: ALTEX, Numer 4/yr, 2023, Strona(/y) 706-712, ISSN 1868-596X
Wydawca: Springer Spektrum
DOI: 10.14573/altex.2310021

The application of natural language processing for the extraction of mechanistic information in toxicology

Autorzy: Marie Corradi, Thomas Luechtefeld, Alyanne M. de Haan, Raymond Pieters, Jonathan H. Freedman, Tamara Vanhaecke, Mathieu Vinken, Marc Teunis
Opublikowane w: Frontiers in Toxicology, Numer 6, 2024, ISSN 2673-3080
Wydawca: Frontiers
DOI: 10.3389/ftox.2024.1393662

Machine learning classification of steatogenic compounds using toxicogenomics profiles

Autorzy: Brian Bwanya, Saad Lodhi, Theo M. de Kok, Luiz Ladeira, Marcha CT Verheijen, Danyel GJ Jennen, Florian Caiment
Opublikowane w: Toxicology, Numer 517, 2025, Strona(/y) 154237, ISSN 0300-483X
Wydawca: Elsevier BV
DOI: 10.1016/j.tox.2025.154237

Metabolomics in Preclinical Drug Safety Assessment: Current Status and Future Trends

Autorzy: Fenna Sillé, Thomas Hartung
Opublikowane w: Metabolites, Numer 14(2), 98, 2024, ISSN 2218-1989
Wydawca: MDPI
DOI: 10.3390/metabo14020098

Quantitative structure–activity relationships of chemical bioactivity toward proteins associated with molecular initiating events of organ-specific toxicity

Autorzy: Domenico Gadaleta, Marina Garcia de Lomana, Eva Serrano-Candelas, Rita Ortega-Vallbona, Rafael Gozalbes, Alessandra Roncaglioni, Emilio Benfenati
Opublikowane w: Journal of Cheminformatics, Numer 16, 2024, ISSN 1758-2946
Wydawca: Chemistry Central
DOI: 10.1186/s13321-024-00917-x

Predicting Liver-Related In Vitro Endpoints with Machine Learning to Support Early Detection of Drug-Induced Liver Injury

Autorzy: Marina Garcia de Lomana, Domenico Gadaleta, Marian Raschke, Robert Fricke, Floriane Montanari
Opublikowane w: Chemical Research in Toxicology, Numer 38, 2025, Strona(/y) 656-671, ISSN 0893-228X
Wydawca: American Chemical Society
DOI: 10.1021/acs.chemrestox.4c00453

Using in silico tools to predict flame retardant metabolites for more informative exposomics-based approaches

Autorzy: Breanne Kincaid, Przemyslaw Piechota, Emily Golden, Mikhail Maertens, Thomas Hartung, Alexandra Maertens
Opublikowane w: Frontiers in Toxicology, Numer 5, 2023, Strona(/y) 45307, ISSN 2673-3080
Wydawca: Frontiers
DOI: 10.3389/ftox.2023.1216802

Alternative methods go green! Green toxicology as a sustainable approach for assessing chemical safety and designing safer chemicals

Autorzy: Alexandra Maertens, Thomas Luechtefeld, Jean Knight, Thomas Hartung
Opublikowane w: ALTEX, Numer Vol. 41 No. 1, 2024, ISSN 1868-8551
Wydawca: Springer International Publishing AG
DOI: 10.14573/altex.2312291

AI as the New Frontier in Chemical Risk Assessment

Autorzy: Thomas Hartung
Opublikowane w: Frontiers in Artificial Intelligence, 2023, Strona(/y) 1-4, ISSN 0922-6389
Wydawca: IOS Press
DOI: 10.3389/frai.2023.1269932

4.2 million and counting… The animal toll for REACH systemic toxicity studies

Autorzy: Jean Knight, Thomas Hartung, Costanza Rovida
Opublikowane w: ALTEX, Numer 4/yr, 2023, Strona(/y) 389-407, ISSN 1868-8551
Wydawca: Springer Spektrum
DOI: 10.14573/altex.2303201

The Development of a Non-Invasive Screening Method Based on Serum microRNAs to Quantify the Percentage of Liver Steatosis

Autorzy: Polina Soluyanova, Guillermo Quintás, Álvaro Pérez-Rubio, Iván Rienda, Erika Moro, Marcel van Herwijnen, Marcha Verheijen, Florian Caiment, Judith Pérez-Rojas, Ramón Trullenque-Juan, Eugenia Pareja, Ramiro Jover
Opublikowane w: Biomolecules, Numer 14, 2025, Strona(/y) 1423, ISSN 2218-273X
Wydawca: MDPI
DOI: 10.3390/biom14111423

Replacement of animal testing by integrated approaches to testingand assessment (IATA): a call for in vivitrosi

Autorzy: Caloni F, De Angelis I, Hartung T
Opublikowane w: Archives of Toxicology, Numer 96, 2022, Strona(/y) 1935–1950, ISSN 0340-5761
Wydawca: Springer Verlag
DOI: 10.1007/s00204-022-03299-x

The Good, The Bad, and The Perplexing: Structural Alerts and Read-Across for Predicting Skin Sensitization Using Human Data

Autorzy: Emily Golden, Daniel C. Ukaegbu, Peter Ranslow, Robert H. Brown, Thomas Hartung, Alexandra Maertens
Opublikowane w: Chemical Research in Toxicology, Numer 36, 2023, Strona(/y) 734-746, ISSN 0893-228X
Wydawca: American Chemical Society
DOI: 10.1021/acs.chemrestox.2c00383

Prediction of the Neurotoxic Potential of Chemicals Based on Modelling of Molecular Initiating Events Upstream of the Adverse Outcome Pathways of (Developmental) Neurotoxicity

Autorzy: Domenico Gadaleta, Nicoleta Spînu, Alessandra Roncaglioni, Mark T. D. Cronin, Emilio Benfenati
Opublikowane w: International Journal of Molecular Sciences, Numer 23(6), 2022, Strona(/y) 3053, ISSN 1422-0067
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms23063053

The effects of hexabromocyclododecane on the transcriptome and hepatic enzyme activity in three human HepaRG-based models

Autorzy: Susana Proença, Nick van Sabben, Juliette Legler, Jorke H. Kamstra, Nynke I. Kramer
Opublikowane w: Toxicology, Numer Volume 485, February 2023, 153411, 2023, ISSN 0300-483X
Wydawca: Elsevier BV
DOI: 10.1016/j.tox.2022.153411

G × E interactions as a basis for toxicological uncertainty

Autorzy: Ilinca Suciu, David Pamies, Roberta Peruzzo, Petra H. Wirtz, Lena Smirnova, Giorgia Pallocca, Christof Hauck, Mark T. D. Cronin, Jan G. Hengstler, Thomas Brunner, Thomas Hartung, Ivano Amelio, and Marcel Leist
Opublikowane w: Archives of Toxicology, 2023, Strona(/y) 2035–2049, ISSN 0340-5761
Wydawca: Springer Verlag
DOI: 10.1007/s00204-023-03500-9

Challenges and opportunities for validation of AI-based new approach methods

Autorzy: Thomas Hartung, Nicole Kleinstreuer
Opublikowane w: ALTEX, Numer 42, 2025, Strona(/y) 1-21, ISSN 1868-596X
Wydawca: ALTEX Edition
DOI: 10.14573/altex.2412291

From big data to smart decisions: artificial intelligence in kidney risk assessment

Autorzy: Devon A. Barnes, Luiz Ladeira, Rosalinde Masereeuw
Opublikowane w: Nature Reviews Nephrology, Numer Monthly, 2025, ISSN 1759-5061
Wydawca: Nature Publishing Group
DOI: 10.1038/s41581-025-00962-1

Artificial intelligence (AI)—it’s the end of the tox as we know it (and I feel fine)

Autorzy: Nicole Kleinstreuer, Thomas Hartung
Opublikowane w: Archives of Toxicology, Numer Vol 98, 2024, Strona(/y) 735–754, ISSN 0340-5761
Wydawca: Springer Verlag
DOI: 10.1007/s00204-023-03666-2

Predicting the Mitochondrial Toxicity of Small Molecules: Insights from Mechanistic Assays and Cell Painting Data

Autorzy: Marina Garcia de Lomana, Paula Andrea Marin Zapata, and Floriane Montanari
Opublikowane w: Chemical Research in Toxicology, Numer Volume 36, issue 7, 2023, Strona(/y) 1107–1120, ISSN 0893-228X
Wydawca: American Chemical Society
DOI: 10.1021/acs.chemrestox.3c00086

DockTox: Targeting molecular initiating events in organ toxicity through molecular docking

Autorzy: Rita Ortega-Vallbona, David Talavera-Cortés, Laureano E. Carpio, Jessica Coto Palacio, Alessandra Roncaglioni, Marina Garcia De Lomana, Domenico Gadaleta, Emilio Benfenati, Rafael Gozalbes, Eva Serrano-Candelas
Opublikowane w: Toxicology, Numer 515, 2025, Strona(/y) 154155, ISSN 0300-483X
Wydawca: Elsevier BV
DOI: 10.1016/j.tox.2025.154155

Systematic evaluation of high-throughput PBK modelling strategies for the prediction of intravenous and oral pharmacokinetics in humans

Autorzy: René Geci, Domenico Gadaleta, Marina García de Lomana, Rita Ortega-Vallbona, Erika Colombo, Eva Serrano-Candelas, Alicia Paini, Lars Kuepfer, Stephan Schaller
Opublikowane w: Archives of Toxicology, Numer 98, 2024, Strona(/y) 2659-2676, ISSN 0340-5761
Wydawca: Springer Verlag
DOI: 10.1007/s00204-024-03764-9

REACH out-numbered! The future of REACH and animal numbers

Autorzy: Costanza Rovida, Francois Busquet, Marcel Leist, Thomas Hartung
Opublikowane w: ALTEX, Numer 4/yr, 2023, Strona(/y) 367-388, ISSN 1868-8551
Wydawca: Springer Spektrum
DOI: 10.14573/altex.2307121

From cellular perturbation to probabilistic risk assessments

Autorzy: Alexandra Maertens, Breanne Kincaid, Eric Bridgeford, Celine Brochot, Arthur de Carvalho e Silva, Jean-Lou C. M. Dorne, Liesbet Geris, Trine Husøy, Nicole Kleinstreuer, Luiz C. M. Ladeira, Alistair Middleton, Joe Reynolds, Blanca Rodriguez, Erwin L. Roggen, Giulia Russo, Kris Thayer, Thomas Hartung
Opublikowane w: ALTEX, Numer Vol. 42 No. 3 (2025), 2025, Strona(/y) 413–434, ISSN 1868-596X
Wydawca: ALTEX Edition
DOI: 10.14573/altex.2501291

Connexin-Based Channel Activity Is Not Specifically Altered by Hepatocarcinogenic Chemicals

Autorzy: Kaat Leroy, Alanah Pieters, Axelle Cooreman, Raf Van Campenhout, Bruno Cogliati, Mathieu Vinken
Opublikowane w: International Journal of Molecular Sciences, Numer 22/21, 2021, Strona(/y) 11724, ISSN 1422-0067
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms222111724

A systematic review of in vitro models of drug-induced kidney injury

Autorzy: Alasdair R. Irvine, Damiën van Berlo, Rawan Shekhani, Rosalinde Masereeuw
Opublikowane w: Current Opinion in Toxicology, Numer 27, 2021, Strona(/y) 18-26, ISSN 2468-2020
Wydawca: Elsevier
DOI: 10.1016/j.cotox.2021.06.001

The probable future of toxicology - probabilistic risk assessment

Autorzy: Alexandra Maertens, Eric Antignac, Emilio Benfenati, Denise Bloch, Ellen Fritsche, Sebastian Hoffmann, Joanna Jaworska, George Loizou, Kevin McNally, Przemyslaw Piechota, Erwin L. Roggen, Marc Teunis, Thomas Hartung
Opublikowane w: ALTEX, Numer N/A, 2024, Strona(/y) N/A, ISSN 1868-8551
Wydawca: Springer International Publishing AG
DOI: 10.14573/altex.2310301

Primary Human Hepatocyte Spheroids as Tools to Study the Hepatotoxic Potential of Non-Pharmaceutical Chemicals

Autorzy: Vânia Vilas-Boas, Eva Gijbels, Kaat Leroy, Alanah Pieters, Audrey Baze, Céline Parmentier, Mathieu Vinken
Opublikowane w: International Journal of Molecular Sciences, Numer 22/20, 2021, Strona(/y) 11005, ISSN 1422-0067
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms222011005

Development of an adverse outcome pathway network for nephrotoxicity

Autorzy: D A Barnes, J W Firman, S J Belfield, M T D Cronin, M Vinken, M J Janssen, R Masereeuw
Opublikowane w: Archives of Toxicology, Numer Volume 98, 2024, Strona(/y) 929-942, ISSN 0340-5761
Wydawca: Springer Verlag
DOI: 10.1007/s00204-023-03637-7

First steps for creating an ontology for cognitivefunction defects for regulatory application

Autorzy: Eliska Kuchovska, Alessio Gamba, Luiz Carlos Maia Ladeira, Bernard Staumont, Raphaëlle Lesage, Inger-Lise Steffensen, Graciela Lopez Soop
Opublikowane w: 21st International Congress ESTIV Abstract Book, Numer annual, 2022, Strona(/y) 48-49, ISBN 978-80-969474-8-5
Wydawca: ESTIV

P04-06 New approaches for evaluating kidney toxicity using physiological maps

Autorzy: Alessio Gamba, Luiz Carlos Maia Ladeira, Raphaëlle Lesage, Devon Barnes, Daniël Roodzant, Marc Teunis, Manoe Janssen, Rosalinde Masereeuw, Liesbet Geris, Bernard Staumont
Opublikowane w: Toxicology Letters, Numer Volume 368, Supplement, 1 September 2022, 2022, Strona(/y) S101, ISSN 0378-4274
Wydawca: ELSEVIER BV
DOI: 10.1016/j.toxlet.2022.07.290

Physiological Map to Study Kidney Toxicity in the ONTOX Project.

Autorzy: Alessio Gamba, Luiz Carlos Maia Ladeira, Raphaëlle Lesage, Daniël Roodzant, Devon Barnes, Manoe Janssen, Marc Teunis, Rosalinde Masereeuw, Liesbet Geris, Bernard Staumont
Opublikowane w: 21st International Congress ESTIV Abstract Book, Numer annual, 2022, Strona(/y) 120-121, ISBN 978-80-969474-8-5
Wydawca: ESTIV

Development of an Adverse Outcome Pathway for Kidney Tubular Necrosis

Autorzy: Devon Barnes, Alasdair Irvine, Alessio Gamba, Luiz Carlos Maia Ladeira, Bernard Staumont, Huan Yang, Inger-Lise Steffensen, Liesbet Geris, Manoe Janssen, and Rosalinde Masereeuw
Opublikowane w: 21st International Congress ESTIV Abstract Book, Numer annual, 2022, Strona(/y) 186-187, ISBN 978-80-969474-8-5
Wydawca: ESTIV

Protocol for a systematic scoping review

Autorzy: Trine Husøy, Michael Guy Diemar, Erwin Roggen, Maria Kalyva, Hubert Dirven, Gunn Elisabeth Vist
Opublikowane w: Methods and tools for assessing chemical exposure in humans: protocol for a systematic scoping review - prosjektbeskrivelse, 2021
Wydawca: NIPH

An AI supported case study applying in vitro studies using the ONTOX toolbox: Protocol for probabilistic risk assessment of perfluoroctanoic acid (PFOA)

Autorzy: Trine Husøy (team leader) Camilla Svendsen Maria Kalyva Hubert Dirven Michael Guy Diemar Erwin L Roggen Devon A. Barnes Job Berkhout Maria Corradi Annika Drees Ellen Fritsche Domenico Gadeleta Thomas Hartung Ramiro Jover Nynke Kramer Eliska Kuchovska Luiz Carlos Maia Ladeira Thomas Luechtefeld Amy Maerten Alexandra Maertens Rosalinde Masereeuw Oddvar Myhre Rita Ortega Susana Proença Alessandra R
Opublikowane w: 2025
Wydawca: Folkehelseinstituttet website

P17-07 Computational modelling of neural tube closure defects

Autorzy: Job H Berkhout, Aldert H Piersma, Juliette Legler, Harm J Heusinkveld
Opublikowane w: Toxicology letters, Numer Volume 368, Supplement, 1 September 2022, 2022, Strona(/y) S229, ISSN 0378-4274
Wydawca: ELSEVIER BV
DOI: 10.1016/j.toxlet.2022.07.617

P01-07 Development of an adverse outcome pathway for kidney tubular necrosis

Autorzy: Devon Barnes, A. Irvine, Alessio Gamba, Bernard Staumont, Luiz C Maia Ladeira, Huan Yang, Inger-Lise Stffensen, Liesbet Geris, Manoe Janssen, Roos Masereeuw
Opublikowane w: Toxicology Letters, Numer Volume 368, Supplement, 1 September 2022, 2022, Strona(/y) S86-S87, ISSN 0378-4274
Wydawca: ELSEVIER BV
DOI: 10.1016/j.toxlet.2022.07.251

Designing Physiological Maps as a Tool to Study Liver Toxicology

Autorzy: Luiz Carlos Maia Ladeira, Alessio Gamba, Raphaëlle Lesage, Anouk Verhoeven, Jonas van Ertvelde, Jian Jiang, Daniël Roodzant, Marc Teunis, Ramiro Jover, Tamara Vanhaecke, Mathieu Vinken, Harm Heusinkveld, Liesbet Geris, Bernard Staumont.
Opublikowane w: 21st International Congress ESTIV Abstract Book, Numer annual, 2022, Strona(/y) 123-124, ISBN 978-80-969474-8-5
Wydawca: ESTIV

Computational Modelling of Neural Tube Closure Defects

Autorzy: Job Berkhout, Aldert Piersma, Juliette Legler, Alessio Gamba, Luiz Carlos Maia Ladeira, Bernard Staumont, Raphaëlle Lesage, Liesbet Geris, and Harm Heuseinkveld
Opublikowane w: 21st International Congress ESTIV Abstract Book, Numer annual, 2022, Strona(/y) 127, ISBN 978-80-969474-8-5
Wydawca: ESTIV

P11-09 Physiology-based framework to study chemical-induced cholestasis

Autorzy: Luiz Carlos Maia Ladeira, Alessio Gamba, Raphaëlle Lesage, Jonas van Ertvelde, Jian Jiang, Anouk Verhoeven, Daniël Roodzant, Marc Teunis, Ramiro Jover, Tamara Vanhaecke, Mathieu Vinken, Liesbet Geris, Bernard Staumont
Opublikowane w: Toxicology Letters, Numer Volume 368, Supplement, 1 September 2022, 2022, Strona(/y) S165-S166, ISSN 0378-4274
Wydawca: ELSEVIER BV
DOI: 10.1016/j.toxlet.2022.07.459

SOC-VI-08 Physiological maps: a benchmark tool for adverse outcome pathways and a cornerstone for the development of disease ontologies

Autorzy: Bernard Staumont, Luiz Carlos Maia Ladeira, Alessio Gamba, Raphaëlle Lesage, Anouk Verhoeven, Jian Jiang, Jonas van Ertvelde, Devon Barnes, Manoe Janssen, Eliska Kuchovska, Job Berkhout, Daniël Roodzant, Marc Teunis, Thomas Bozada Jr, Thomas Luechtefeld, Ramiro Jover, Tamara Vanhaecke, Mathieu Vinken, Rosalinde Masereeuw, Ellen Fritsche, Aldert Piersma, Harm Heusinkveld, Liesbet Geris
Opublikowane w: Toxicology Letters, Numer Volume 368, Supplement, 1 September 2022, 2022, Strona(/y) S77-S78, ISSN 0378-4274
Wydawca: ELSEVIER BV
DOI: 10.1016/j.toxlet.2022.07.228

Multi-task Proteochemometric Modelling

Autorzy: Anastasia Pentina, and Djork-Arné Clevert
Opublikowane w: ChemRxiv, 2022, ISSN 2573-2293
Wydawca: Cambridge Open Engage
DOI: 10.26434/chemrxiv-2022-d5tzd

SKIG report 2023-2024

Autorzy: Wittwehr, Clemens ; Audouze, Karine ; Burgdorf, Tanja ; Clerbaux, Laure-Alix ; Coerek, Emre ; Demuynck, Emmanuel ; Exner, Thomas ; Filipovska, Julija ; Fritsche, Ellen ; Geris, Liesbet ; Hench, Virginia ; Jeliazkova, Nina ; Karschnik, Travis ; Kuchovska, Eliska ; Maia Ladeira, Luiz Carlos ; Malinowska, Julia M ; Marinov, Evgeni ; Martens, Marvin ; Mertens, Birgit ; Nymark, Penny ; Schaffert, Alexa
Opublikowane w: EU publications, 2025, Strona(/y) 26665, ISSN 1831-9424
Wydawca: Publications Office of the European Union
DOI: 10.2760/7749010

Report of the First ONTOX Hackathon: Hack to Save Lives and Avoid Animal Suffering. The Use of Artificial Intelligence in Toxicology — A Potential Driver for Reducing/Replacing Laboratory Animals in the Future

Autorzy: Michael G. Diemar, Cyrille A.M. Krul, Marc Teunis, Francois Busquet, Helena Kandarova, Julia D. Zajac, Mathieu Vinken, Erwin L. Roggen
Opublikowane w: Alternatives to Laboratory Animals, Numer 53, 2025, Strona(/y) 42-61, ISSN 0261-1929
Wydawca: Fund for the Replacement of Animals in Medical Experiments
DOI: 10.1177/02611929241305112

Probabilistic Risk Assessment –The Keystone for the Future of Toxicology

Autorzy: Maertens A, Golden E, Luechtefeld T, Hoffmann S, Tsaioun K
Opublikowane w: Altex- Alternatives to animal experimentation, Numer 39/1, 2022, Strona(/y) 3–29, ISSN 1868-8551
Wydawca: Springer-Spektrum
DOI: 10.14573/altex.2201081

Adverse outcome pathway networks as the basis for the development of new approach methodologies: Liver toxicity as a case study

Autorzy: Mathieu Vinken
Opublikowane w: Current Opinion in Toxicology, Numer 40, 2024, Strona(/y) 100504, ISSN 2468-2020
Wydawca: Elsevier
DOI: 10.1016/j.cotox.2024.100504

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